Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq86 179 4e-40 seq1459 111 2e-19 seq5694 109 7e-19 seq80 95.1 1e-14 >seq86 Length=1688118 Score = 179 bits (198), Expect = 4e-40 Identities = 836/1308 (64%), Gaps = 48/1308 (4%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| || ||||||||| Sbjct 230548 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAG 230489 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || |||||||| || || | || |||||||| | | || | || || ||| Sbjct 230488 GCGGTGGGCATCGGGGCGAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCC 230429 Query 114062 TTGAGGGCGTCCCAGTC------GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAAC 114115 || || | |||||| || | || |||| |||||| |||| || || Sbjct 230428 TTCAGCAGCTTCCAGTCCAACAGGTCGGTGGGCTTCTTCTCCC------ACATGTCGTAC 230375 Query 114116 TGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC 114175 || || || || | | | | || || || || | |||||||| ||||| | | Sbjct 230374 TGCAGAATCCCCTTGCTGACCGGAGACCCTTCGTAAGTCTCGTACGGGCCGAGCTCGGCA 230315 Query 114176 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235 |||| ||| |||| ||||| ||||| |||| || || |||||||| ||| || ||| Sbjct 230314 GCCAGCTCGCAGCTTGCCTCAAGGGCGGCGTAGTAGATCGTCTCAAAGATGTGAATGTTC 230255 Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295 | || |||||| | ||||||| | || | || || | || || | | Sbjct 230254 AGCAACTGGGCCTCTGGGCTTTCAAACGGGTACCGCATGAGGATGAAGGCGTCAGCCAAA 230195 Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC--- 114352 || || || |||| ||||| || | || | | | || ||||| ||| |||| Sbjct 230194 CCCTGAACGCCGATACCAATCGGCCTGTGACGCTTGTTTGACTTCT---CGGCCTCCGGT 230138 Query 114353 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 114412 || ||||| || || | ||||| | | | || | || ||| || ||| || |||| Sbjct 230137 ACAGGATAGAAGTTGATCTCGATGATCTTGTTCAAGTTCTTGACGATAACTTTGGTGACG 230078 Query 114413 TCATGAAGCTTTTCGTAA--TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 114470 ||| || |||| ||| |||||| | || ||| |||||||| | || | Sbjct 230077 TCAGCTAG--TTTCTTAAAGTCAAAAGTCCG---CTCAGAGGTGACATACATGTTGAGTG 230023 Query 114471 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 114530 | || || ||||||||||| || | ||||| | ||||| || | ||||| | Sbjct 230022 CAATGGAAGCCAGATTACAAACGGCTACTTCATCATGGCTGGTGTATTCAACGATTTCTG 229963 Query 114531 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 114590 | || | || ||||| |||||||||| |||| || || | |||| |||| || | Sbjct 229962 TGCAGAGGTTGCTGCTCTTGATGGTGCCCAGATTCTGATGGTTGGTCTTTCTGTTGCAGG 229903 Query 114591 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 114650 | || || |||||||||||||| || || || || || ||||||| || || || | || Sbjct 229902 CGTCTTTATAAAGCATGTATGGAGTACCTGTTTCTGTCTGGGACTCGATGATTGCGTGCC 229843 Query 114651 AGACATCGGCGGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 114709 | || | ||| || || || || | | |||||||| ||| || ||||| Sbjct 229842 ACACCTGCTGAGCTTTCACCACACGC-TTCACCCTCCCCTCCTTCTCATATGAGGTGTAA 229784 Query 114710 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAG 114769 || |||||||| || ||| | ||| ||||| || || || || || | Sbjct 229783 AGCTTCTCAAACTCCTCCCCCCAGCACTCATCCAGCCCAGGGCACTCATTAGGACACATC 229724 Query 114770 AGAGACCATTGACCACCCT--CCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAG 114827 |||||||| | || | ||| || | |||||||| ||||| |||||||| | | Sbjct 229723 AGAGACCA--GTCCTGGTTGCTCTCTACTCTTTTCATGAACAGGTCGGGGATCCACATGG 229666 Query 114828 CTGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 114886 | ||||||| || | | | ||| || | | || || || || |||||| Sbjct 229665 CGTAGAAGAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAAG 229607 Query 114887 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACC----CCTTACG 114942 ||||| | | ||| |||||| || || ||||||| |||| | | |||| | Sbjct 229606 AAGTCAAACACATCAAAGTGCCAGGGCTCAAGGTACATGGCGAAGGCTCCGGGCCTTTTG 229547 Query 114943 ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGAT 115002 ||| |||||| ||||| | ||| ||| || | || | ||||| || | | Sbjct 229546 -TTTCCACCCTGGTCGACATAACGCGCCGTGTTGTTGTACACTCTCAGCATGGGGACAAG 229488 Query 115003 ACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG--GCTCTGACATCATGG 115060 ||| | || | ||||||||| || ||| | || || | ||| | | || | Sbjct 229487 ACCGTTTGAGTTGCCATTTGTGCCGGCAAT--GTAGCTCCCTGTCGATCTAATA-CA--G 229433 Query 115061 ATG--TGC-ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 115117 || ||| | || || || || || | || ||||| | ||||||| | | ||| || Sbjct 229432 CTGACTGCTACGCCGATTCCTCCAGCTGATTTGGAGATGAGGGCGCACTGCTTCAGAGTG 229373 Query 115118 CCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGT 115177 | || || || || || ||| | || | || | ||||||||||| |||| ||| Sbjct 229372 TCATAAATGCCTTCAATGCTGTCGTCTTTCATGGCTAGCAGGAAGCAGCTGGACAGCTGT 229313 Query 115178 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225 ||||| || || || ||||||||||| |||| ||||| ||||| Sbjct 229312 GGCCTGTTGGTTCCTGCATTGAAGAGGGTAGGTGAGGCGTGTGTGAAC 229265 >seq1459 Length=39823 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| ||||||||||| | | ||| || || || |||||| ||| || ||||| || || Sbjct 12989 GTGCAGACCCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCC 13048 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||| |||||| |||||| || || |||||||||||||| |||||||| Sbjct 13049 GCGCTTCTTCAGCCAGAAGATCGCAGCGAACGACCCCGAGAAGAAGATCCCCTCCACGGC 13108 Query 126178 CGCGAACGCAAAGAGACGCTC 126198 |||||||| | || ||||| Sbjct 13109 AGCGAACGCCACGACTCGCTC 13129 >seq5694 Length=14491 Score = 109 bits (120), Expect = 7e-19 Identities = 506/786 (64%), Gaps = 24/786 (3%) Strand=Plus/Plus Query 114453 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512 |||||||| | || || || || ||||||||||| || | ||||| | | Sbjct 55 TGACATACATGTTGAGTGCAATGGAAGCCAGATTACAAACGGCTACTTCATCATGGCTGG 114 Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572 |||| || | ||||| || || | || ||||| |||||||||| |||| || | Sbjct 115 TGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTCTTGATGGTGCCCAGATTCTGATGGT 174 Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632 | | |||| |||| || || || || |||||||||||||| || || || || || |||| Sbjct 175 TGGTCTTTCTGTTGCAGGCGTCTTTATAAAGCATGTATGGAGTACCTGTTTCTGTCTGGG 234 Query 114633 ACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCC 114691 ||| || || || | ||| || | ||| || || || || | | ||||||| Sbjct 235 ACTCGATGATTGCGTGCCACACCTGCTGAGCTTTCACCACACGC-TTCACCCTCCCCTCC 293 Query 114692 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 114751 | ||| || ||||| || |||||||| || |||| | ||| ||||| || Sbjct 294 TTCTCATATGAGGTGTAAAGCTTCTCAAACTCCTCCCCCA-GCACTCATCCAGCCCAGGG 352 Query 114752 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCT--CCTCAACACGCTTCATGAAGA 114809 || || || || | |||||||| | || | ||| || | |||||||| | Sbjct 353 CACTCATTAGGACACATCAGAGACCA--GTCCTGGTTGCTCTCTACTCTTTTCATGAACA 410 Query 114810 GGTCTGGGATCCAGAGAGCTGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGA 114868 |||| |||||||| | || ||||||| || | | | ||| || | | || || Sbjct 411 GGTCGGGGATCCACATGGCGTAGAAGAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG- 469 Query 114869 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 114928 || || |||||| ||||| | | ||| |||||| || || ||||||| ||| Sbjct 470 TTCTTCTTCAGCTCCAAGAAGTCAAACACATCAAAGTGCCAGGGCTCAAGGTACATGGCG 529 Query 114929 ATTGACC----CCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATAC 114984 | | | |||| | ||| |||||| ||||| | ||| ||| || | || Sbjct 530 AAGGCTCCGGGCCTTTTG-TTTCCACCCTGGTCGACATAACGCGCCGTGTTGTTGTACAC 588 Query 114985 GCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATT 115044 | ||||| || | | ||| | || | ||||||||| || ||| | || | Sbjct 589 TCTCAGCATGGGGACAAGACCGTTTGAGTTGCCATTTGTGCCGGCAAT--GTAGCTCCCT 646 Query 115045 G--GCTCTGACATCATGGATG--TGC-ATACCAATACCCCCTGCCCACTTTGAGATTTGC 115099 | | ||| | | || | || ||| | || || || || || | || ||||| | Sbjct 647 GTCGATCTAATA-CA--GCTGACTGCTACGCCGATTCCTCCAGCTGATTTGGAGATGAGG 703 Query 115100 GCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGG 115159 ||||||| | | ||| || | || || || || || ||| | || | || | ||| Sbjct 704 GCGCACTGCTTCAGAGTGTCATAAATGCCTTCAATGCTGTCGTCTTTCATGGCTAGCAGG 763 Query 115160 AAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219 |||||||| |||| |||||||| || || || ||||||||||| |||| ||||| Sbjct 764 AAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCTGCATTGAAGAGGGTAGGTGAGGCGTGT 823 Query 115220 ATGAAC 115225 ||||| Sbjct 824 GTGAAC 829 >seq80 Length=1733396 Score = 95.1 bits (104), Expect = 1e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| ||||||| | |||||||||| |||| ||| ||||| ||||| Sbjct 121012 TAGATGTTGCTGGTGTAAGGCTCAATGGACTCATTGTTGCCCAGGATCTGGGCAGTGGAA 121071 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 ||||||||||| || |||| ||| || ||||| Sbjct 121072 GCTGTGGGCATTGGGGCCAGGAGCAGACTGTT 121103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597253050455280