Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq4673 118 1e-21 seq349 104 2e-17 >seq4673 Length=16361 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | || |||||||| || |||||||| || | || |||||| | || Sbjct 2250 AAGAACCAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 2309 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| |||||||||||||| | || || |||||||| ||||| || || || ||||| || Sbjct 2310 TTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCGGGGGGGATACCCTCTTTATC 2369 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || ||| | || || | || ||||| || | || | ||| Sbjct 2370 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGT 2429 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| |||| || || || || || ||||| Sbjct 2430 CTTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 2462 Score = 113 bits (124), Expect = 5e-20 Identities = 153/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | || || || || || |||||||| || | || |||||| | ||| Sbjct 2024 AGCACAAG-TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 2082 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || || |||||||| ||||| || ||||||||||| || Sbjct 2083 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGGGATTCCTTCTTTATCC 2142 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || ||| | || || | || ||||| || | || | |||| Sbjct 2143 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 2202 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| |||| || || || || || ||||| Sbjct 2203 TTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 2234 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | || || || || || |||||||| || | || |||||| | ||| Sbjct 2479 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 2538 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || || |||||||| ||||| || || ||||| || || Sbjct 2539 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGGGATCCCTTCCTTATCC 2598 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||| |||| | ||||| || | ||| | |||| Sbjct 2599 TGGATCTTGGCCTTGACATTTTCAATTGTGTCACTTGGCTCCACCTCCAAAGTGATGGTC 2658 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || ||||| | || || || || || ||||| || Sbjct 2659 TTCCCGGTTAGGGTCTTCACAAAGATCTGCATCTT 2693 >seq349 Length=568042 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || || || || |||||||| || | || |||||| ||||| Sbjct 323396 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 323337 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || |||| |||||| || || ||||| ||||| || || Sbjct 323336 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 323277 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | || || | | ||||| || | || | || Sbjct 323276 TGGATCTTAGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTT 323217 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || ||||| || ||||| Sbjct 323216 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 323185 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || |||||| | ||||| |||||||||||| Sbjct 326715 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 326656 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || ||||| || || || || || || || ||| Sbjct 326655 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 326596 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | | ||||| |||| || | ||||||||| || | || Sbjct 326595 ACATTTTCAATGGTGTCGCTTGGCTCCACCTCTAGGGTGATGGTCTTGCCAGTGAGGGTC 326536 Query 64427 TTTACGAAAATTTGCATTTT 64446 || || || || ||||| || Sbjct 326535 TTCACAAAGATCTGCATGTT 326516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499560697289040