Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq86 163 3e-35 seq5694 147 2e-30 >seq86 Length=1688118 Score = 163 bits (180), Expect = 3e-35 Identities = 892/1406 (63%), Gaps = 43/1406 (3%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | || ||||| ||||| || || ||| ||||||| |||| || |||||| Sbjct 229275 GCCTCACCTACCCTCTTCAATGCAGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTG 229334 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | | || | |||| ||| || |||| |||| || ||| | || || | Sbjct 229335 CTAGCCATGAAAGACGACAGCATTGAAGGCATTTATGACACTCTGAAGCAGTGCGCCCTC 229394 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCAC-GACGTACGT-GCCAGGGGTT 94069 ||||| |||| || || |||||||| | ||| | | || | | ||||| Sbjct 229395 ATCTCCAAATCAGCTGGAGGAATCGGCGTAGCAGTCAGCTGTATTAGATCGACAGGGAG- 229453 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 |||||| ||| || ||||||| ||| ||||| || ||||| ||||| | || | || Sbjct 229454 -CTACATTGCCGGCACAAATGGCAACTCAAACGGTCTTGTCCCCATGCTGAGAGTGTACA 229512 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 ||||| ||||||| || || ||||||||||| | ||| || | ||||| | | Sbjct 229513 ACAACACGGCGCGTTATGTCGACCAGGGTGGAAACAAAAGGCCCGGAGCCTTCGCCATGT 229572 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | || |||||||||||| || ||| | ||| | || ||| |||||| || | Sbjct 229573 ACCTTGAGCCCTGGCACTTTGATGTGTTTGACTTCTTGGAGCTGAAGAAGAACACAGGAA 229632 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | || | |||| |||||||||||||||||||| | ||| | || ||||| || |||| Sbjct 229633 AGGAGGAGCAGAGAGCCAGAGACCTCTTCTACGCCATGTGGATCCCCGACCTGTTCATGA 229692 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 || | || |||| ||| | |||| ||| | ||||| ||||| || || || ||| Sbjct 229693 AAAGAGTAGAGAGCAACCAGGACTGGTCTCTGATGTGTCCTAATGAGTGCCCTGGGCTGG 229752 Query 94370 CCGA-CGTTTGTGGATCGCGTTT-TGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAA 94427 || | | | || | |||| |||| ||| || | || || | |||| | Sbjct 229753 ATGAGTGCTGGGGGGAGGAGTTTGAGAAG-CTT-TACACCTCATATGAGAAGGAGGGGAG 229810 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 || | | || || | ||| | || ||||| | ||| | || ||| || Sbjct 229811 GGTGAAGCGTGTGGTGAAAGCTCAGCAGGTGTGGCACGCAATCATCGAGTCCCAGACAGA 229870 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 || ||||| || ||||| | | || ||| | |||| ||| ||||||| ||| | Sbjct 229871 AACAGGTACTCCATACATGCTTTATAAAGACGCCTGCAACAGAAAGACCAACCATCAGAA 229930 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 || || ||||||||| || || ||||| || || || || || || | || Sbjct 229931 TCTGGGCACCATCAAGAGCAGCAACCTCTGCACAGAAATCGTTGAATACACCAGCCATGA 229990 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT- 94666 || | || || ||||| |||| ||||| | |||| | | ||| | Sbjct 229991 TGAAGTAGCCGTTTGTAATCTGGCTTCCAT-------TGCACT------CAACATGTATG 230037 Query 94667 ACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCT 94726 ||| ||| | || || | || | || | || || | | || ||| Sbjct 230038 TCACCTCTGAGCGGACTTTTGACTTTAAGAAACTAGCTGACGTCACCAAAGTTATCGTCA 230097 Query 94727 TGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAA 94786 |||| |||||| | | ||||| | |||||||| || || |||||||| ||||| |||| Sbjct 230098 AGAACTTGAACAAGATCATCGAGATCAACTTCTATCCTGTACCGGAGGCCGAGAAGTCAA 230157 Query 94787 ACCTGAAGCATC---GGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGA 94843 || |||| || |||| || || |||||||| |||||||| || ||||| | | Sbjct 230158 AC---AAGCGTCACAGGCCGATTGGTATCGGCGTTCAGGGTTTGGCTGACGCCTTCATCC 230214 Query 94844 TGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTT--TGAATTTGAACATATTCGA 94901 | ||||| || | || | | | | | ||| |||| | |||| || || Sbjct 230215 TCATGCGGTACCCGTTTGA--AAGCCCAGAGGCCCAGTTGCTGAACATTCACATCTTTGA 230272 Query 94902 AAGCATTTATTACG-GGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGC 94960 | || || |||| | || ||| ||| | | | | |||| | || ||| | Sbjct 230273 GACGATCTACTACGCCGCCCTTGAGGCAAGCTG-CGAGCTGGC---TGCCGAGCTCGGCC 230328 Query 94961 CACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGG 95020 | |||| | | | || || || | |||| ||| | |||| |||| | |||| Sbjct 230329 CGTACGAGACTTACGAAGGGTCTCCGGTCAGCAAGGGGATTCTGCAGTACGACATGTGGG 230388 Query 95021 GTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCT-CT--ACGCGCTGATGTTATCAAAC 95077 ||||||| | | |||| |||| ||||||| || | | | || | ||||| Sbjct 230389 AGAAGAAGCCCACCGACCTGTTGGACT-GGAAGCTGCTGAAGGAGAAGA--TCGCCAAAC 230445 Query 95078 ACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCC 95137 | || |||| ||| ||||| | ||||| |||||||| |||||||| || ||||||| Sbjct 230446 ATGGCGTGAGGAACAGCCTGCTGCTCGCCCCGATGCCCACCGCCTCCACCGCACAGATCC 230505 Query 95138 TTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCG 95197 | |||||||||||||| |||| ||| |||| |||| | |||| | | | || || Sbjct 230506 TGGGCAACAACGAGTCCATCGAGGCCTACACCAGCAACATCTACACCCGCAGAGTCCTGT 230565 Query 95198 CCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGT 95257 | || || || | || ||||| || || || ||||||||| ||| ||| Sbjct 230566 CTGGAGAGTTTCAGATCGTCAACCCTCATCTGCTCAAAGACCTGACGGAGAAGGGGCTGT 230625 Query 95258 GGGGTGACAAGGTCAAGAACCAACTG 95283 || | || || | ||||| || ||| Sbjct 230626 GGAGCGAGGAGATGAAGAATCAGCTG 230651 >seq5694 Length=14491 Score = 147 bits (162), Expect = 2e-30 Identities = 322/479 (67%), Gaps = 4/479 (1%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | || ||||| ||||| || || ||| ||||||| |||| || |||||| Sbjct 819 GCCTCACCTACCCTCTTCAATGCAGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTG 760 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | | || | |||| ||| || |||| |||| || ||| | || || | Sbjct 759 CTAGCCATGAAAGACGACAGCATTGAAGGCATTTATGACACTCTGAAGCAGTGCGCCCTC 700 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCAC-GACGTACGT-GCCAGGGGTT 94069 ||||| |||| || || |||||||| | ||| | | || | | ||||| Sbjct 699 ATCTCCAAATCAGCTGGAGGAATCGGCGTAGCAGTCAGCTGTATTAGATCGACAGGGAG- 641 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 |||||| ||| || ||||||| ||| ||||| || ||||| ||||| | || | || Sbjct 640 -CTACATTGCCGGCACAAATGGCAACTCAAACGGTCTTGTCCCCATGCTGAGAGTGTACA 582 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 ||||| ||||||| || || ||||||||||| | ||| || | ||||| | | Sbjct 581 ACAACACGGCGCGTTATGTCGACCAGGGTGGAAACAAAAGGCCCGGAGCCTTCGCCATGT 522 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | || |||||||||||| || ||| | ||| | || ||| |||||| || | Sbjct 521 ACCTTGAGCCCTGGCACTTTGATGTGTTTGACTTCTTGGAGCTGAAGAAGAACACAGGAA 462 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | || | |||| |||||||||||||||||||| | ||| | || ||||| || |||| Sbjct 461 AGGAGGAGCAGAGAGCCAGAGACCTCTTCTACGCCATGTGGATCCCCGACCTGTTCATGA 402 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368 || | || |||| ||| | |||| ||| | ||||| ||||| || || || ||| Sbjct 401 AAAGAGTAGAGAGCAACCAGGACTGGTCTCTGATGTGTCCTAATGAGTGCCCTGGGCTG 343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494639925717360