Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq86 122 8e-23 seq5694 95.1 1e-14 >seq86 Length=1688118 Score = 122 bits (134), Expect = 8e-23 Identities = 346/525 (66%), Gaps = 15/525 (3%) Strand=Plus/Plus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665 ||||| || || || |||||||| || ||||||||||||||||| || ||||| || Sbjct 229869 GAAACAGGTACTCCATACATGCTTTATAAAGACGCCTGCAACAGAAAGACCAACCATCAG 229928 Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCC 123725 || |||| || || || | || || || ||| | ||||| | ||||||| | ||| Sbjct 229929 AATCTGGGCACCATCAAGAGCAGCAACCTCTGCACAGAAATCGTTGAATACACC--AGCC 229986 Query 123726 --GATCAAGTGGCCGTGTGTAATTTGGCTTCGATT------TGCGTGAATCGTTGCGTCG 123777 ||| |||| ||||| |||||| ||||||| ||| | || || || | || Sbjct 229987 ATGATGAAGTAGCCGTTTGTAATCTGGCTTCCATTGCACTCAACATGTAT-GTCACCTC- 230044 Query 123778 AAAACGGCGCTTTTAATTT-CCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAAT 123836 | ||| ||| | ||| |||| | ||| | || ||| | | || ||||| Sbjct 230045 TGAGCGGACTTTTGACTTTAAGAAACTAGCTGACG--TCACCAAAGTTATCGTCAAGAAC 230102 Query 123837 TTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTG 123896 |||||||| || ||||| | || || |||||| | ||| || ||| || | Sbjct 230103 TTGAACAAGATCATCGAGATCAACTTCTATCCTGTACCGGAGGCCGAGAAGTCAAACAAG 230162 Query 123897 AAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGC 123956 ||||| ||| | || | ||| |||| || ||||| ||||| || | | |||| Sbjct 230163 CGTCACAGGCCGATTGGTATCGGCGTTCAGGGTTTGGCTGACGCCTTCATCCTCATGCGG 230222 Query 123957 ATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTAT 124016 |||| |||||| || || ||||||| || | || || || || || || Sbjct 230223 TACCCGTTTGAAAGCCCAGAGGCCCAGTTGCTGAACATTCACATCTTTGAGACGATCTAC 230282 Query 124017 TACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTAC 124076 |||| ||| | ||||| |||||||| || || | |||| ||||||| | |||| Sbjct 230283 TACGCCGCCCTTGAGGCAAGCTGCGAGCTGGCTGCCGAGCTCGGCCCGTACGAGACTTAC 230342 Query 124077 GCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGG 124121 | || |||| ||| || ||| ||||||||||||||||| Sbjct 230343 GAAGGGTCTCCGGTCAGCAAGGGGATTCTGCAGTACGACATGTGG 230387 >seq5694 Length=14491 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/155 (74%), Gaps = 4/155 (3%) Strand=Plus/Minus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665 ||||| || || || |||||||| || ||||||||||||||||| || ||||| || Sbjct 226 GAAACAGGTACTCCATACATGCTTTATAAAGACGCCTGCAACAGAAAGACCAACCATCAG 167 Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCC 123725 || |||| || || || | || || || ||| | ||||| | ||||||| | ||| Sbjct 166 AATCTGGGCACCATCAAGAGCAGCAACCTCTGCACAGAAATCGTTGAATACACC--AGCC 109 Query 123726 --GATCAAGTGGCCGTGTGTAATTTGGCTTCGATT 123758 ||| |||| ||||| |||||| ||||||| ||| Sbjct 108 ATGATGAAGTAGCCGTTTGTAATCTGGCTTCCATT 74 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451927116561360