Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03]
13,466 sequences; 805,480,521 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq209 109 8e-19
seq14 102 1e-16
seq490 84.2 3e-11
>seq209
Length=958208
Score = 109 bits (120), Expect = 8e-19
Identities = 174/248 (70%), Gaps = 4/248 (2%)
Strand=Plus/Minus
Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992
|| || ||||||||||| | || || || || || |||||||||| |||||||||
Sbjct 643301 GTAGCCGTTTTCACGATATTGAAGCCCGTCTCTCCTCCAAAGGTGCTGGACTTCCAGTAC 643242
Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052
| ||||||||||| || |||| || || ||||| || || ||||| |||| |||
Sbjct 643241 TCAGGGGAGCAGATTGGATTTCCCATCAGGCCCTTCAAAGAGAAGGGAGCACCCATCTCT 643182
Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAG 9112
| || |||||||| || ||| | | | ||| | ||| || | | || |||||||||
Sbjct 643181 ACCATACTCTCACCAAATATGCCGTCAGAACGAGTTTTCTCCAATAGGACGCCAGTGTAA 643122
Query 9113 AGTTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAA--CTCGGCAGCTATCTCCTTCT 9170
|| || | ||| || | ||| || || | | ||||| ||| | || || || |||
Sbjct 643121 AGCTCTAAAGCATCTATGTCACCGTACAATTCCTCCAAACCTCTG--GCCATTTCTGTCT 643064
Query 9171 CACCTACA 9178
||||| ||
Sbjct 643063 CACCTGCA 643056
>seq14
Length=2926375
Score = 102 bits (112), Expect = 1e-16
Identities = 107/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 9553 TCAGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGG 9612
||||||| || | |||||| |||| |||||||||||||||| || || |||||||||
Sbjct 959187 TCAGGCATAAGTGGGTGCCAGTGGTACAGGGTATTGAACTCGGATGCAATGCGGTTCTGG 959128
Query 9613 TACTGAAAG-GCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCC 9671
||||| ||| || | | |||||| | ||| |||||||| | |||| ||||| || ||
Sbjct 959127 TACTGGAAGCGCTG-GCTGAACAGCAGCTCGGGGTCAAACTTGAGCTTGAAGTTATAACC 959069
Query 9672 GCTGAGTTGCTGGACATA 9689
||| || ||||| || ||
Sbjct 959068 GCTCAGGTGCTGCACGTA 959051
>seq490
Length=353978
Score = 84.2 bits (92), Expect = 3e-11
Identities = 154/226 (68%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 8942 TTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAG 9001
|||| ||||| || || || | || || ||||||||||| |||||||| | || ||
Sbjct 135710 TTCAGTATGTCGAACCCCACTTTACCTCCAAAGGTGCTGGGCTTCCAGTATTCAGGAGAA 135769
Query 9002 CAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTC 9061
|| ||| ||| ||| ||| ||||| | || || || || |||| ||| | ||||||
Sbjct 135770 CATATGGGGTTTCCCAGGAGGCCTTTAAGAGAGAAAGGGGCACCCATCTCCACCATGCTC 135829
Query 9062 TCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACA 9121
||||| || |||| || | || | | || | || | |||| || | ||| | |
Sbjct 135830 TCACCAAATATGGACCCCTGTCGTGTGGTCTCCAGCATCAGACCAGGATAAAATTCAAGA 135889
Query 9122 GCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCT 9167
|| || | ||| ||||| | |||| | ||| ||||||||||
Sbjct 135890 GCATCAATGTCTCCATATAACTCTTCAAGTTCGCTGGCTATCTCCT 135935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723606178484400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |