Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq209 109 8e-19 seq14 102 1e-16 seq490 84.2 3e-11 >seq209 Length=958208 Score = 109 bits (120), Expect = 8e-19 Identities = 174/248 (70%), Gaps = 4/248 (2%) Strand=Plus/Minus Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992 || || ||||||||||| | || || || || || |||||||||| ||||||||| Sbjct 643301 GTAGCCGTTTTCACGATATTGAAGCCCGTCTCTCCTCCAAAGGTGCTGGACTTCCAGTAC 643242 Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052 | ||||||||||| || |||| || || ||||| || || ||||| |||| ||| Sbjct 643241 TCAGGGGAGCAGATTGGATTTCCCATCAGGCCCTTCAAAGAGAAGGGAGCACCCATCTCT 643182 Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAG 9112 | || |||||||| || ||| | | | ||| | ||| || | | || ||||||||| Sbjct 643181 ACCATACTCTCACCAAATATGCCGTCAGAACGAGTTTTCTCCAATAGGACGCCAGTGTAA 643122 Query 9113 AGTTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAA--CTCGGCAGCTATCTCCTTCT 9170 || || | ||| || | ||| || || | | ||||| ||| | || || || ||| Sbjct 643121 AGCTCTAAAGCATCTATGTCACCGTACAATTCCTCCAAACCTCTG--GCCATTTCTGTCT 643064 Query 9171 CACCTACA 9178 ||||| || Sbjct 643063 CACCTGCA 643056 >seq14 Length=2926375 Score = 102 bits (112), Expect = 1e-16 Identities = 107/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 9553 TCAGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGG 9612 ||||||| || | |||||| |||| |||||||||||||||| || || ||||||||| Sbjct 959187 TCAGGCATAAGTGGGTGCCAGTGGTACAGGGTATTGAACTCGGATGCAATGCGGTTCTGG 959128 Query 9613 TACTGAAAG-GCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCC 9671 ||||| ||| || | | |||||| | ||| |||||||| | |||| ||||| || || Sbjct 959127 TACTGGAAGCGCTG-GCTGAACAGCAGCTCGGGGTCAAACTTGAGCTTGAAGTTATAACC 959069 Query 9672 GCTGAGTTGCTGGACATA 9689 ||| || ||||| || || Sbjct 959068 GCTCAGGTGCTGCACGTA 959051 >seq490 Length=353978 Score = 84.2 bits (92), Expect = 3e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 8942 TTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAG 9001 |||| ||||| || || || | || || ||||||||||| |||||||| | || || Sbjct 135710 TTCAGTATGTCGAACCCCACTTTACCTCCAAAGGTGCTGGGCTTCCAGTATTCAGGAGAA 135769 Query 9002 CAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTC 9061 || ||| ||| ||| ||| ||||| | || || || || |||| ||| | |||||| Sbjct 135770 CATATGGGGTTTCCCAGGAGGCCTTTAAGAGAGAAAGGGGCACCCATCTCCACCATGCTC 135829 Query 9062 TCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACA 9121 ||||| || |||| || | || | | || | || | |||| || | ||| | | Sbjct 135830 TCACCAAATATGGACCCCTGTCGTGTGGTCTCCAGCATCAGACCAGGATAAAATTCAAGA 135889 Query 9122 GCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCT 9167 || || | ||| ||||| | |||| | ||| |||||||||| Sbjct 135890 GCATCAATGTCTCCATATAACTCTTCAAGTTCGCTGGCTATCTCCT 135935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723606178484400