Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq86 172 7e-38 seq5694 116 5e-21 seq1459 107 2e-18 seq80 98.7 1e-15 >seq86 Length=1688118 Score = 172 bits (190), Expect = 7e-38 Identities = 833/1301 (64%), Gaps = 34/1301 (3%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 ||||||||| | ||||| | ||| | | |||| ||||| |||| ||| || || |||||| Sbjct 230548 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAG 230489 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || |||||||| || || | || |||||||| | | || || ||| Sbjct 230488 GCGGTGGGCATCGGGGCGAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCC 230429 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082 || || | |||||| | | | | || | ||||||||| || |||| || Sbjct 230428 TTCAGCAGCTTCCAGTCCAACAGGTCGGTGGGCTTCTTCTCCCACATGTCGTACTGCAGA 230369 Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142 || || | | | || || || || | ||||| || ||||| | | |||| Sbjct 230368 ATCCCCTTGCTGACCGGAGACCCTTCGTAAGTCTCGTACGGGCCGAGCTCGGCAGCCAGC 230309 Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCC 116202 ||| |||| ||||| ||||| |||| || || |||||||| ||| || |||| | Sbjct 230308 TCGCAGCTTGCCTCAAGGGCGGCGTAGTAGATCGTCTCAAAGATGTGAATGTTCAGCAAC 230249 Query 116203 TTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA-ATAAATACATCCGCGAGACCTTG 116261 | |||||| | ||||||| | || ||| | || || | || || | ||| || Sbjct 230248 TGGGCCTCTGGGCTTTCAAACGGGT-ACCGCATGAGGATGAAGGCGTCAGCCAAACCCTG 230190 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGG 116318 || |||| ||||| || | || | | | || ||||| ||| |||| || || Sbjct 230189 AACGCCGATACCAATCGGCCTGTGACGCTTGTTTGACTTCT---CGGCCTCCGGTACAGG 230133 Query 116319 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 116378 ||| || || | ||||| | | | || | || ||| || ||| || |||| ||| Sbjct 230132 ATAGAAGTTGATCTCGATGATCTTGTTCAAGTTCTTGACGATAACTTTGGTGACGTCAGC 230073 Query 116379 AAGCTTTTCGTAA--TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 116436 || |||| ||| |||||| | || ||| |||||||| | || || || Sbjct 230072 TAG--TTTCTTAAAGTCAAAAGTCCG---CTCAGAGGTGACATACATGTTGAGTGCAATG 230018 Query 116437 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 116496 || ||||||||||| || | ||||| | ||||| || | ||||| || || Sbjct 230017 GAAGCCAGATTACAAACGGCTACTTCATCATGGCTGGTGTATTCAACGATTTCTGTGCAG 229958 Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556 | || ||||| |||||||||| |||| || || | |||| |||| || || || Sbjct 229957 AGGTTGCTGCTCTTGATGGTGCCCAGATTCTGATGGTTGGTCTTTCTGTTGCAGGCGTCT 229898 Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACA 116616 || || ||||| ||||| || || || || || ||||||| || || || | ||| || Sbjct 229897 TTATAAAGCATGTATGGAGTACCTGTTTCTGTCTGGGACTCGATGATTGCGTGCCACACC 229838 Query 116617 TCGGCGGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGC 116675 | ||| || || || || | | |||||||| ||| || ||||| || Sbjct 229837 TGCTGAGCTTTCACCACACGC-TTCACCCTCCCCTCCTTCTCATATGAGGTGTAAAGCTT 229779 Query 116676 CTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAG 116734 ||||||||| || ||| |||| ||| ||||| || || || ||||| | |||| Sbjct 229778 CTCAAACTCCTC-CCCCCAGCACTCATCCAGCCCAGGGCACTCATTAGGACACATCAGAG 229720 Query 116735 ACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 116792 |||| | || | ||| || | |||||||| ||||| |||||||| | || | Sbjct 229719 ACCA--GTCCTGGTTGCTCTCTACTCTTTTCATGAACAGGTCGGGGATCCACATGGCGTA 229662 Query 116793 GAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 116851 |||||| || | | | ||| || | | || || || || |||||| |||| Sbjct 229661 GAAGAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAAGAAGT 229603 Query 116852 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACC----CCTTGCGACGA 116907 | | | ||| |||||| || || ||||||| |||| | | |||| | Sbjct 229602 CAAACACATCAAAGTGCCAGGGCTCAAGGTACATGGCGAAGGCTCCGGGCCTTTTG-TTT 229544 Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCA 116967 ||| |||||| ||||| | |||||| ||| | || | ||||| || | | ||| Sbjct 229543 CCACCCTGGTCGACATAACGCGCCGTGTTGTTGTACACTCTCAGCATGGGGACAAGACCG 229484 Query 116968 TCAGATTGGCCATTTGTCCCCCGAAT-ACGAGACTTGTTGGCTCTGACATCGTGGATGTG 117026 | || | ||||||||| || ||| | | || | | ||| | | | || || Sbjct 229483 TTTGAGTTGCCATTTGTGCCGGCAATGTAGCTCCCTG-TCGATCTAATACAGCTGA-CTG 229426 Query 117027 C-ATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGA 117085 | | || || || || || | || ||||| | ||||||| | | ||| || | || | Sbjct 229425 CTACGCCGATTCCTCCAGCTGATTTGGAGATGAGGGCGCACTGCTTCAGAGTGTCATAAA 229366 Query 117086 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTG 117145 | || || || ||| | || | || | ||||||||||| |||| |||||||| Sbjct 229365 TGCCTTCAATGCTGTCGTCTTTCATGGCTAGCAGGAAGCAGCTGGACAGCTGTGGCCTGT 229306 Query 117146 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 117186 || || || ||||||||||| |||| ||||| ||||| Sbjct 229305 TGGTTCCTGCATTGAAGAGGGTAGGTGAGGCGTGTGTGAAC 229265 >seq5694 Length=14491 Score = 116 bits (128), Expect = 5e-21 Identities = 506/784 (65%), Gaps = 20/784 (3%) Strand=Plus/Plus Query 116414 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 116473 |||||||| | || || || || ||||||||||| || | ||||| | | Sbjct 55 TGACATACATGTTGAGTGCAATGGAAGCCAGATTACAAACGGCTACTTCATCATGGCTGG 114 Query 116474 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 116533 |||| || | ||||| || || | || ||||| |||||||||| |||| || | Sbjct 115 TGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTCTTGATGGTGCCCAGATTCTGATGGT 174 Query 116534 TTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGG 116593 | | |||| |||| || || || || || ||||| ||||| || || || || || |||| Sbjct 175 TGGTCTTTCTGTTGCAGGCGTCTTTATAAAGCATGTATGGAGTACCTGTTTCTGTCTGGG 234 Query 116594 ACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCC 116652 ||| || || || | ||| || | ||| || || || || | | ||||||| Sbjct 235 ACTCGATGATTGCGTGCCACACCTGCTGAGCTTTCACCACACGC-TTCACCCTCCCCTCC 293 Query 116653 TCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCA-CAGCCTCTGAGAGCCCTGG 116711 | ||| || ||||| || ||||||||| || |||| || ||| ||||| || Sbjct 294 TTCTCATATGAGGTGTAAAGCTTCTCAAACTCCTCCCCCAGCA--CTCATCCAGCCCAGG 351 Query 116712 TGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAG 116769 || || ||||| | |||||||| | || | ||| || | |||||||| Sbjct 352 GCACTCATTAGGACACATCAGAGACCA--GTCCTGGTTGCTCTCTACTCTTTTCATGAAC 409 Query 116770 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTG 116828 ||||| |||||||| | || ||||||| || | | | ||| || | | || || Sbjct 410 AGGTCGGGGATCCACATGGCGTAGAAGAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG 469 Query 116829 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 116888 || || |||||| ||||| | | ||| |||||| || || ||||||| || Sbjct 470 -TTCTTCTTCAGCTCCAAGAAGTCAAACACATCAAAGTGCCAGGGCTCAAGGTACATGGC 528 Query 116889 GATTGACC----CCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATA 116944 || | | |||| | ||| |||||| ||||| | |||||| ||| | | Sbjct 529 GAAGGCTCCGGGCCTTTTG-TTTCCACCCTGGTCGACATAACGCGCCGTGTTGTTGTACA 587 Query 116945 CGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAAT-ACGAGACTTG 117003 | | ||||| || | | ||| | || | ||||||||| || ||| | | || Sbjct 588 CTCTCAGCATGGGGACAAGACCGTTTGAGTTGCCATTTGTGCCGGCAATGTAGCTCCCTG 647 Query 117004 TTGGCTCTGACATCGTGGATGTGC-ATACCAATACCCCCTGCCCACTTTGAGATTTGTGC 117062 | | ||| | | | || ||| | || || || || || | || ||||| | || Sbjct 648 -TCGATCTAATACAGCTGA-CTGCTACGCCGATTCCTCCAGCTGATTTGGAGATGAGGGC 705 Query 117063 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAA 117122 ||||| | | ||| || | || || || || || ||| | || | || | ||||| Sbjct 706 GCACTGCTTCAGAGTGTCATAAATGCCTTCAATGCTGTCGTCTTTCATGGCTAGCAGGAA 765 Query 117123 GCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGAT 117182 |||||| |||| |||||||| || || || ||||||||||| |||| ||||| | Sbjct 766 GCAGCTGGACAGCTGTGGCCTGTTGGTTCCTGCATTGAAGAGGGTAGGTGAGGCGTGTGT 825 Query 117183 GAAC 117186 |||| Sbjct 826 GAAC 829 >seq1459 Length=39823 Score = 107 bits (118), Expect = 2e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| ||||||||||| | | ||| || || || |||||| ||| || ||||| || || Sbjct 12989 GTGCAGACCCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCC 13048 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||||| |||||| |||||| || || || |||||||||||||||||||| Sbjct 13049 GCGCTTCTTCAGCCAGAAGATCGCAGCGAACGACCCCGAGAAGAAGATCCCCTCCACGGC 13108 Query 127651 CGCGAACGC 127659 |||||||| Sbjct 13109 AGCGAACGC 13117 >seq80 Length=1733396 Score = 98.7 bits (108), Expect = 1e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 ||||||||| | ||||| ||||||| | |||||||||| |||| ||| ||||| ||||| Sbjct 121012 TAGATGTTGCTGGTGTAAGGCTCAATGGACTCATTGTTGCCCAGGATCTGGGCAGTGGAA 121071 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||||||||||| || |||| ||| || ||||| Sbjct 121072 GCTGTGGGCATTGGGGCCAGGAGCAGACTGTT 121103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613403931400560