Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq86 143 4e-29 seq5694 129 9e-25 seq1459 113 7e-20 seq80 87.8 3e-12 >seq86 Length=1688118 Score = 143 bits (158), Expect = 4e-29 Identities = 349/517 (68%), Gaps = 15/517 (3%) Strand=Plus/Minus Query 204100 CCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCCT-CGTCTCCTCCCCCCACATGCCC 204157 ||||| | || ||||| | | ||||| || || || | ||||||| | ||||| ||| Sbjct 230676 CCTGAATGGAACCGTTATGACCAATCAG-CTGATTCTTCATCTCCTCGCTCCACAGCCCC 230618 Query 204158 AACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACC 204217 | |||| || | ||| || ||||||| ||||||||| ||||| ||||| || Sbjct 230617 TTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTGACGATCTGAAACTCTCCAGACAGGACT 230558 Query 204218 CCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGA 204277 | |||||| | | |||| ||||| | | |||| | |||||||||||| | ||||| Sbjct 230557 CTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGT 230498 Query 204278 GCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGG 204337 |||||| ||| |||||||| || || || |||||| ||| | ||| || | ||| | Sbjct 230497 GCGGTGGAGGCGGTGGGCATCGGGGCGAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCG 230438 Query 204338 ACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCG 204397 | | | |||||| ||||||| || | |||| ||| ||||||||||| Sbjct 230437 ATCTTCTCCTTCAGCAGCTTCCAGTCCAACAGGTCGGTGGGCTTCTTCTCCCACATGTCG 230378 Query 204398 AACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATA-AGGCTGATCCTC 204456 |||| | || || | ||||| || || | ||| ||| || ||| || ||| Sbjct 230377 TACTGCAGAATCCCCTTGCTGACCGGAGACCCTTCGTAAGTCTCGTACGGGCCGA-GCTC 230319 Query 204457 TTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAAC 204516 | ||||||| ||| || | | |||| ||||| || ||||||||||| |||| Sbjct 230318 GGCAGCCAGCTCGCAGCTTGCCTCAAGGGCGGCGTAGTAGATCGTCTCAAAGATGTGAAT 230259 Query 204517 GTTTA--ATCTGGCGGCCTCCGTTCCGTCAAACGCCAGACCCAGCATG-GCA--AACACG 204571 ||| | | ||| |||||| | | ||||||| | | ||||| | | || || Sbjct 230258 GTTCAGCAACTG--GGCCTCTGGGCTTTCAAACG---GGTACCGCATGAGGATGAAGGCG 230204 Query 204572 TCCGCCAAGCCCTGCACTCCGATTCCCAACGGTCTGT 204608 || ||||| ||||| || ||||| || | ||| |||| Sbjct 230203 TCAGCCAAACCCTGAACGCCGATACCAATCGGCCTGT 230167 Score = 132 bits (146), Expect = 8e-26 Identities = 576/896 (64%), Gaps = 24/896 (3%) Strand=Plus/Minus Query 204884 TCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGAC 204943 || ||||| || ||||| | ||| | || ||| | |||| || ||| ||||| | | Sbjct 229975 TCAACGATTTCTGTGCAGAGGTTGCTGCTCTTGATGGTGCCCAGATTCTGATGGTTGGTC 229916 Query 204944 TTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TCG 205002 || | ||| |||| ||| || || | |||| | || | || | || |||| || ||| Sbjct 229915 TTTCTGTTGCAGGCGTCTTTATAAAGCATGTATGGAGTACCTGTTTCTGTCTGGGACTCG 229856 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCT---CCACTTGCTTCACGTACATCCCTTGAGA 205059 || || | | ||||| | |||| | |||| ||||||| | |||| | Sbjct 229855 ATGATTGCGTG-CCACACCTGCTGAGCTTTCACCACACGCTTCAC---CCTCCCCTCCTT 229800 Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTA-CACGTCCATCAGCCCTGGAC 205118 ||| ||| ||||| ||| | |||| || || | ||| || |||||| || | Sbjct 229799 CTCATATGAGGTGTAAAGCTTCTCAAACTCCTCCCCCCAGCAC-TCATCCAGCCCAGGGC 229741 Query 205119 ATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTC-ACCCTCTCCATAAACAGG 205177 | | || ||||||||||||||||| ||| | | || || || || | ||| |||||| Sbjct 229740 ACTCATTAGGACACATCAGAGACCAGTCCTGGTTG-CTCTCTACTCTTTTCATGAACAGG 229682 Query 205178 TCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTC 205237 ||| |||||||| | |||| || || || | ||| || | || | ||| |||| Sbjct 229681 TCGGGGATCCACATGGCGTAGAAGAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGTTC 229622 Query 205238 TTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCAT 205296 || |||| |||| ||| | | | || |||||| ||||| | ||| ||| | Sbjct 229621 TTCTTCAGCTCCAAG-AAGTCAAACACATCAAAGTGCCAGGGCTCAAGGTACATGGCGAA 229563 Query 205297 TGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCG 205356 || || ||||| ||||| ||||||||||| || || | | | |||| | |||| Sbjct 229562 GGCTCCGGGCCTTTTGTTTCCACCCTGGTCGACATAACGCGCCGTGTTGTTGTACACTCT 229503 Query 205357 CAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGC 205416 |||||| || || |||||||| | | | || || |||| | ||| ||| | Sbjct 229502 CAGCATGGGGACAAGACCGTTTGAGTTGCCATTTGTGCCGGCAATGTAGCTCCCTGTCGA 229443 Query 205417 CCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACTC 205476 || | | || || |||| || || |||| | |||| ||| ||||||||| Sbjct 229442 TCTAATACAGCTGACTGCTACGCCGATTCCTCCAGCTGATTTGGAGATGAGGGCGCACTG 229383 Query 205477 TTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGA 205536 | ||||||| || |||||| | ||| ||||| || | | ||| |||| Sbjct 229382 CTTCAGAGTGTCATAAATGCCTTCAATGCTGTCGTCTTTCATGGCTAGCAGGAAGCAGCT 229323 Query 205537 AGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGC 205595 | ||||| |||| |||||| || || | |||||| || || |||||| |||| | Sbjct 229322 GGACAGCTGTGGC-CTGTTGGTTCCTGCATTGAAGAGGGTAGGTGAGGCGTGTGTGAACC 229264 Query 205596 GCTTCTCGCTCAAACACC----TGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGA 205651 ||| |||| ||| | |||||||||| | | || | ||| | ||| Sbjct 229263 ACTT----CTCAGACAGCAGGTTGTAGGTCTCGATGGCTGCATCTATGTCGGATTTGTGG 229208 Query 205652 ATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCACC 205711 || || | | | ||||| | | ||| || |||||||| ||| | |||| | | Sbjct 229207 ATTCCGACAGAAACTCTCATCAGCATGTGCTGTGGTCTCTCAGCCACTTTTCCGTTAATC 229148 Query 205712 TTGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTTGAAGGTGTAGTC 205767 || ||||| |||| | ||| ||||| || | | || |||||| ||| | |||| Sbjct 229147 TTCAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTAGGAGAAGTC 229092 Score = 111 bits (122), Expect = 3e-19 Identities = 113/145 (78%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 203917 CCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTT 203976 ||| ||||| | ||||||| | |||||||| ||| || || || ||||| ||||| Sbjct 231088 CCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCATAGTTAGGTTCAGCGATGTGGATGTT 231029 Query 203977 CAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGGTCT 204035 ||| |||||||| ||||||||| |||||||| || || || ||||| |||| | ||||| Sbjct 231028 CAGGGACTGGCTCTGGTCGATG-AAGGCGCCGCGGTCAGCCGCCATCTTGAGCACGGTCT 230970 Query 204036 TCTGCGAAATCTCCCACACCGTCTT 204060 |||| ||||| ||||| || || || Sbjct 230969 TCTGGGAAATTTCCCAAACGGTTTT 230945 >seq5694 Length=14491 Score = 129 bits (142), Expect = 9e-25 Identities = 574/895 (64%), Gaps = 23/895 (3%) Strand=Plus/Plus Query 204884 TCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGAC 204943 || ||||| || ||||| | ||| | || ||| | |||| || ||| ||||| | | Sbjct 120 TCAACGATTTCTGTGCAGAGGTTGCTGCTCTTGATGGTGCCCAGATTCTGATGGTTGGTC 179 Query 204944 TTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TCG 205002 || | ||| |||| ||| || || | |||| | || | || | || |||| || ||| Sbjct 180 TTTCTGTTGCAGGCGTCTTTATAAAGCATGTATGGAGTACCTGTTTCTGTCTGGGACTCG 239 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCT---CCACTTGCTTCACGTACATCCCTTGAGA 205059 || || | | ||||| | |||| | |||| ||||||| | |||| | Sbjct 240 ATGATTGCGTG-CCACACCTGCTGAGCTTTCACCACACGCTTCAC---CCTCCCCTCCTT 295 Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACA 205119 ||| ||| ||||| ||| | |||| || || ||| || |||||| || || Sbjct 296 CTCATATGAGGTGTAAAGCTTCTCAAACTCCTCCCCCAGCAC-TCATCCAGCCCAGGGCA 354 Query 205120 TTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTC-ACCCTCTCCATAAACAGGT 205178 | || ||||||||||||||||| ||| | | || || || || | ||| ||||||| Sbjct 355 CTCATTAGGACACATCAGAGACCAGTCCTGGTTG-CTCTCTACTCTTTTCATGAACAGGT 413 Query 205179 CGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCT 205238 || |||||||| | |||| || || || | ||| || | || | ||| ||||| Sbjct 414 CGGGGATCCACATGGCGTAGAAGAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGTTCT 473 Query 205239 TTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297 | |||| |||| ||| | | | || |||||| ||||| | ||| ||| | Sbjct 474 TCTTCAGCTCCAAG-AAGTCAAACACATCAAAGTGCCAGGGCTCAAGGTACATGGCGAAG 532 Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357 || || ||||| ||||| ||||||||||| || || | | | |||| | |||| | Sbjct 533 GCTCCGGGCCTTTTGTTTCCACCCTGGTCGACATAACGCGCCGTGTTGTTGTACACTCTC 592 Query 205358 AGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCC 205417 ||||| || || |||||||| | | | || || |||| | ||| ||| | Sbjct 593 AGCATGGGGACAAGACCGTTTGAGTTGCCATTTGTGCCGGCAATGTAGCTCCCTGTCGAT 652 Query 205418 CTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACTCT 205477 || | | || || |||| || || |||| | |||| ||| ||||||||| Sbjct 653 CTAATACAGCTGACTGCTACGCCGATTCCTCCAGCTGATTTGGAGATGAGGGCGCACTGC 712 Query 205478 TGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGAA 205537 | ||||||| || |||||| | ||| ||||| || | | ||| |||| Sbjct 713 TTCAGAGTGTCATAAATGCCTTCAATGCTGTCGTCTTTCATGGCTAGCAGGAAGCAGCTG 772 Query 205538 GCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGCG 205596 | ||||| |||| |||||| || || | |||||| || || |||||| |||| | Sbjct 773 GACAGCTGTGGC-CTGTTGGTTCCTGCATTGAAGAGGGTAGGTGAGGCGTGTGTGAACCA 831 Query 205597 CTTCTCGCTCAAACACC----TGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGAA 205652 ||| |||| ||| | |||||||||| | | || | ||| | ||| | Sbjct 832 CTT----CTCAGACAGCAGGTTGTAGGTCTCGATGGCTGCATCTATGTCGGATTTGTGGA 887 Query 205653 TACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCACCT 205712 | || | | | ||||| | | ||| || |||||||| ||| | |||| | || Sbjct 888 TTCCGACAGAAACTCTCATCAGCATGTGCTGTGGTCTCTCAGCCACTTTTCCGTTAATCT 947 Query 205713 TGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTTGAAGGTGTAGTC 205767 | ||||| |||| | ||| || || || | | || |||||| ||| | |||| Sbjct 948 TCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAGTC 1002 >seq1459 Length=39823 Score = 113 bits (124), Expect = 7e-20 Identities = 123/161 (76%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 159911 TTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTG 159970 || |||| |||||| || |||||||||||||| |||||||| | ||| | ||||||| Sbjct 12963 TTGAACATGAGGCAGGCGAAGTCGCAGTGCAGACCCTCGTCTCTGCTGATCAGCTCGTTG 13022 Query 159971 GACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCA 160030 || | | | ||||| ||||| | || ||| || ||||| || || || || || | | Sbjct 13023 GAGAAGGTCAGGCCGGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATCGCAGCGAACG-A 13081 Query 160031 CCGCTA-AAAAAGATCCCCTCCACGGCCGCAAACGCCACGA 160070 || | | || ||||||||||||||||| || |||||||||| Sbjct 13082 CCCCGAGAAGAAGATCCCCTCCACGGCAGCGAACGCCACGA 13122 >seq80 Length=1733396 Score = 87.8 bits (96), Expect = 3e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251 ||| |||||| ||||| || || |||| || ||| | | |||| ||||| | || || | Sbjct 120977 TGACCTGAAACTCTCCCGAGAGTACCCTGCGCGTGTAGATGTTGCTGGTGTAAGGCTCAA 121036 Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311 | ||| |||||||| | ||||| || ||| || |||||||| || |||||||||| Sbjct 121037 TGGACTCATTGTTGCCCAGGATCTGGGCAGTGGAAGCTGTGGGCATTGGGGCCAGGAGCA 121096 Query 204312 GGGAGTTGCGCACACCGT 204329 | ||| | |||||||| Sbjct 121097 GACTGTTCCTCACACCGT 121114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795021355500960