Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq86 190 3e-43 seq5694 154 2e-32 seq72 95.1 2e-14 seq80 86.0 8e-12 seq1459 84.2 3e-11 >seq86 Length=1688118 Score = 190 bits (210), Expect = 3e-43 Identities = 892/1395 (64%), Gaps = 26/1395 (2%) Strand=Plus/Plus Query 111704 GTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAG 111763 ||||| ||||| |||| ||||||||||| || || || || || || ||||||| Sbjct 229265 GTTCACACACGCCTCACCTACCCTCTTCAATGCAGGAACCAACAGGCCACAGCTGTCCAG 229324 Query 111764 TTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGA 111823 || ||||| | || | || || || || | |||||||| | |||||| | | Sbjct 229325 CTGCTTCCTGCTAGCCATGAAAGACGACAGCATTGAAGGCATTTATGACACTCTGAAGCA 229384 Query 111824 ATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGAT-GCA--CATCCATGATGTCAG 111880 || |||| ||||| || | ||||| || ||||| | ||| || | || | | || Sbjct 229385 GTGCGCCCTCATCTCCAAATCAGCTGGAGGAATCGGCGTAGCAGTCAGC--TG-TATTAG 229441 Query 111881 AGCCAACAAGTCTCGT-ATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGC 111939 | | | || | | ||| || |||||||| | ||| | ||| || | || |||| Sbjct 229442 ATCGA-CAGGGAGCTACATTGCCGGCACAAATGGCAACTCAAACGGTCTTGTCCCCATGC 229500 Query 111940 TTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGG----GA 111995 | | || | ||| ||| ||||| ||||| |||| | ||| | |||| || Sbjct 229501 TGAGAGTGTACAACAACACGGCGCGTTATGTCGACCAGGGTGGAAA-CAAAAGGCCCGGA 229559 Query 111996 TCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGT 112055 | |||| | || |||||||| |||||| ||| | | || ||| | ||| || Sbjct 229560 GCCTTCGCCATGTACCTTGAGCCCTGGCACTTTGATGTGTTTGACTTCTTGGAGCTGAAG 229619 Query 112056 CTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCA 112115 ||| ||| | |||||| | | | | || ||||||| ||| | ||||| || Sbjct 229620 AAGAACACAGGAAAGGAGGAGCAGAGAGCCAGAGACCTCTTCTACGCCATGTGGATCCCC 229679 Query 112116 GATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAG 112175 || || |||||||| ||||| ||| | | |||||||| | ||||| | || Sbjct 229680 GACCTGTTCATGAAAAGAGTAGAGAGCAACCAGGACTGGTCTCTGATGTGTCCTAATGAG 229739 Query 112176 GCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGA 112234 || || || || ||| | ||| ||||||||||| || ||||| || || Sbjct 229740 TGCCCTGGGCTGGATGAGTGCTGGGGG-GAGGAGTTTGAGAAGCTTTACACCTCATATGA 229798 Query 112235 GGAAGAAAGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCA 112293 | | || | ||| || ||| |||| |||| | |||||| | || || || Sbjct 229799 GAAGGAGGGGAGGGTGAA-GCGTGTGGTGAAAGCTCAGCAGGTGTGGCACGCAATCATCG 229857 Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 |||| || || || || ||||| ||||| |||||||| ||||||||||| ||| ||||| Sbjct 229858 AGTCCCAGACAGAAACAGGTACTCCATACATGCTTTATAAAGACGCCTGCAACAGAAAGA 229917 Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 || || ||||| |||| |||||||| ||||||||| ||||||||| | |||| Sbjct 229918 CCAACCATCAGAATCTGGGCACCATCAAGAGCAGCAACCTCTGCACAGAAATCGTTGAAT 229977 Query 112414 TTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATG 112473 || | | ||||| || || ||||| || || || || || ||| || ||||| Sbjct 229978 ACACCAGCCATGATGAAGTAGCCGTTTGTAATCTGGCTTCCATTGCACTCAACATGTATG 230037 Query 112474 TGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCA 112533 | | ||| ||| ||||| | | | ||||| || || || ||| | || Sbjct 230038 TCACCTCTGAG---CGGACTTTTGACTTTAAGAAACTAGCTGACGTCACCAAAGTTATCG 230094 Query 112534 CAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAAT 112593 || ||| | |||| | || || | || || || || || | || || | Sbjct 230095 TCAAGAACTTGAACAAGATCATCGAGATCAACTTCTATCCTGTACCGGAGGCCGAGAAGT 230154 Query 112594 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTC 112653 | || | | | ||| | || |||||| |||| || || ||| | || || | ||||| | Sbjct 230155 CAAACAAGCGTCACAGGCCGATTGGTATCGGCGTTCAGGGTTTGGCTGACGCCTTCATCC 230214 Query 112654 TTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGA 112713 | || || | ||||| | || || || | || | || ||||||| Sbjct 230215 TCATGCGGTACCCGTTTGAAAGCCCAGAGGCCCAGTTGCTGAACATTCACATCTTTGAGA 230274 Query 112714 CAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATG 112773 | || || ||||||| |||||||| || | ||| |||| | | || || || | Sbjct 230275 CGATCTACTACGCCGCCCTTGAGGCAAGCTGCGAGCTGGCTGCCGAGCTCGGCCCGTACG 230334 Query 112774 AAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGGG-TGCTTCAATTTGATATGTGGGAAGG 112831 | || | || || ||||| | ||| ||||||| | || || | || |||||||| Sbjct 230335 AGACTTACGAAGGGTCTCCGG--TCAGCAAGGGGATTCTGCAGTACGACATGTGGGAGAA 230392 Query 112832 TGAGACCAAGCTTCACTACGACTGGGACGCT-CTCAAGGAACGCATCAAGGAGAAGGGTC 112890 || ||| | | |||| ||| ||| || ||||| ||| | | || Sbjct 230393 GAAGCCCACCGACCTGTTGGACT-GGAAGCTGCTGAAGGAGAAGATCGCCAAACATGGCG 230451 Query 112891 TTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 112950 | | ||||| || || | || || ||||| || |||||||||||||| ||| |||| | Sbjct 230452 TGAGGAACAGCCTGCTGCTCGCCCCGATGCCCACCGCCTCCACCGCACAGATCCTGGGCA 230511 Query 112951 ATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAG 113010 | || || | | | || ||||||| | |||||||| | ||| ||| | |||| Sbjct 230512 ACAACGAGTCCATCGAGGCCTACACCAGCAACATCTACACCCGCAGAGTCCTGTCTGGAG 230571 Query 113011 AGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCA 113070 ||||| ||| |||||| ||||| | | ||||| | |||| || || ||| | Sbjct 230572 AGTTTCAGATCGTCAACCCTCATCTGCTCAAAGACCTGACGGAGAAGGGGCTGTGGAGCG 230631 Query 113071 AGGATATGAAGGATC 113085 |||| |||||| ||| Sbjct 230632 AGGAGATGAAGAATC 230646 >seq5694 Length=14491 Score = 154 bits (170), Expect = 2e-32 Identities = 511/781 (65%), Gaps = 18/781 (2%) Strand=Plus/Minus Query 111704 GTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAG 111763 ||||| ||||| |||| ||||||||||| || || || || || || ||||||| Sbjct 829 GTTCACACACGCCTCACCTACCCTCTTCAATGCAGGAACCAACAGGCCACAGCTGTCCAG 770 Query 111764 TTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGA 111823 || ||||| | || | || || || || | |||||||| | |||||| | | Sbjct 769 CTGCTTCCTGCTAGCCATGAAAGACGACAGCATTGAAGGCATTTATGACACTCTGAAGCA 710 Query 111824 ATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGAT-GCA--CATCCATGATGTCAG 111880 || |||| ||||| || | ||||| || ||||| | ||| || | || | | || Sbjct 709 GTGCGCCCTCATCTCCAAATCAGCTGGAGGAATCGGCGTAGCAGTCAGC--TG-TATTAG 653 Query 111881 AGCCAACAAGTCTCGT-ATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGC 111939 | | | || | | ||| || |||||||| | ||| | ||| || | || |||| Sbjct 652 ATCGA-CAGGGAGCTACATTGCCGGCACAAATGGCAACTCAAACGGTCTTGTCCCCATGC 594 Query 111940 TTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGG----GA 111995 | | || | ||| ||| ||||| ||||| |||| | ||| | |||| || Sbjct 593 TGAGAGTGTACAACAACACGGCGCGTTATGTCGACCAGGGTGGAAA-CAAAAGGCCCGGA 535 Query 111996 TCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGT 112055 | |||| | || |||||||| |||||| ||| | | || ||| | ||| || Sbjct 534 GCCTTCGCCATGTACCTTGAGCCCTGGCACTTTGATGTGTTTGACTTCTTGGAGCTGAAG 475 Query 112056 CTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCA 112115 ||| ||| | |||||| | | | | || ||||||| ||| | ||||| || Sbjct 474 AAGAACACAGGAAAGGAGGAGCAGAGAGCCAGAGACCTCTTCTACGCCATGTGGATCCCC 415 Query 112116 GATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAG 112175 || || |||||||| ||||| ||| | | |||||||| | ||||| | || Sbjct 414 GACCTGTTCATGAAAAGAGTAGAGAGCAACCAGGACTGGTCTCTGATGTGTCCTAATGAG 355 Query 112176 GCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGA 112234 || || || || ||| |||| ||||||||||| || ||||| || || Sbjct 354 TGCCCTGGGCTGGATGAGTGC--TGGGGGAGGAGTTTGAGAAGCTTTACACCTCATATGA 297 Query 112235 GGAAGAAAGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCA 112293 | | || | ||| || ||| |||| |||| | |||||| | || || || Sbjct 296 GAAGGAGGGGAGGGTGAA-GCGTGTGGTGAAAGCTCAGCAGGTGTGGCACGCAATCATCG 238 Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 |||| || || || || ||||| ||||| |||||||| ||||||||||| ||| ||||| Sbjct 237 AGTCCCAGACAGAAACAGGTACTCCATACATGCTTTATAAAGACGCCTGCAACAGAAAGA 178 Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 || || ||||| |||| |||||||| ||||||||| ||||||||| | |||| Sbjct 177 CCAACCATCAGAATCTGGGCACCATCAAGAGCAGCAACCTCTGCACAGAAATCGTTGAAT 118 Query 112414 TTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATG 112473 || | | ||||| || || ||||| || || || || || ||| || ||||| Sbjct 117 ACACCAGCCATGATGAAGTAGCCGTTTGTAATCTGGCTTCCATTGCACTCAACATGTATG 58 Query 112474 T 112474 | Sbjct 57 T 57 >seq72 Length=1853568 Score = 95.1 bits (104), Expect = 2e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||| | |||||||| | || || || || ||||| |||||||||||||| || | Sbjct 1652303 CCTTAGGGGAGCGACTTGTGGCTTTCGCAGCAGTGGAGGGCATCTTCTTCTCTGGCTCAT 1652244 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 || || || |||||||| |||||| |||| || ||||||||||| || |||||||| Sbjct 1652243 TCGCTGCCATCTATTGGCTGAAGAAGAGAGGACTAATGCCAGGTCTTACCTACTCCAACG 1652184 Query 102292 AGCTTAT 102298 |||| || Sbjct 1652183 AGCTGAT 1652177 >seq80 Length=1733396 Score = 86.0 bits (94), Expect = 8e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 ||||||| || || |||||||||||||| ||||| ||||| ||||| || ||| |||| Sbjct 122099 AGTCTCAGACAGAAACTGGTACACCATACATGCTCTACAAGGACGCATGCAACAGGAAGA 122040 Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 | || || ||||| |||| |||||| | |||||| || ||||| || | || | Sbjct 122039 GCAACCAGCAGAATCTGGGCACCATCAAGTCTAGCAACCTGTGCACAGAGATTGTCGAGT 121980 Query 112414 TTACAGACAAAGATGAG 112430 ||| ||||||||| Sbjct 121979 ACACAAGTAAAGATGAG 121963 >seq1459 Length=39823 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 102239 |||||| || | || || || || ||||| ||||||||||| || || ||| || Sbjct 13129 GAGCGAGTCGTGGCGTTCGCTGCCGTGGAGGGGATCTTCTTCTCGGGGTCGTTCGCTGCG 13070 Query 102240 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299 || | ||||| |||||||| || || ||||| || || ||||||||||||||| ||| Sbjct 13069 ATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGATC 13010 Query 102300 TCTCGTGACGAGGGACTCCAC 102320 | |||||||| || ||| Sbjct 13009 AGCAGAGACGAGGGTCTGCAC 12989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620637913535520