Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq86 228 1e-54 seq80 113 5e-20 seq1459 86.0 7e-12 >seq86 Length=1688118 Score = 228 bits (252), Expect = 1e-54 Identities = 965/1497 (64%), Gaps = 44/1497 (3%) Strand=Plus/Minus Query 105837 GATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGT 105896 ||| |||||| |||| | ||| || || ||| | | || || |||| ||||| || Sbjct 230646 GATTCTTCATCTCCTCGCTCCACAGCCCCTTCTCCGTCAGGTCTTTGAGCAGATGAGGGT 230587 Query 105897 TGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTT 105956 |||| ||| ||||||||| | ||| ||| | |||||||| | ||||||| | Sbjct 230586 TGACGATCTGAAACTCTCCAGACAGGACTCTGCGGGTGTAGATGTTGCTGGTGTAGGCCT 230527 Query 105957 CAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCA 106016 | | | | || || || |||| ||| |||||||||||||| || ||||| || || | || Sbjct 230526 CGATGGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAGGCGGTGGGCATCGGGGCGAGCA 230467 Query 106017 AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTC----- 106071 || ||||| | | || | || ||| ||||| || | | |||||| Sbjct 230466 GCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCAACA 230407 Query 106072 -GTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCA-CCCCTTG-GGACGT 106128 || | || |||| ||| |||||||| || | || || | ||||||| ||| Sbjct 230406 GGTCGGTGGGCTT--CTTC----TCCCACATGTCGTACTGCAGAATCCCCTTGCTGAC-- 230355 Query 106129 GGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 106188 ||||| || || | ||||| || | || | | |||||| || ||||| ||||| Sbjct 230354 CGGAGACCCTTCGTAAGTCTCGTACGGGCCGAGCTCGGCAGCCAGCTCGCAGCTTGCCTC 230295 Query 106189 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 106248 |||| |||| || || || |||||||| || |||| | || ||| || Sbjct 230294 AAGGGCGGCGTAGTAGATCGTCTCAAAGATGTGAATGTTCAGCAACTGGGCCTCTGGGCT 230235 Query 106249 ATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAAT 106308 ||||| | ||| || | || || | || || | ||| ||||| || | |||||| Sbjct 230234 TTCAAACGGGTACCGCATGAGGATGAAGGCGTCAGCCAAACCCTGAACGCCGATACCAAT 230175 Query 106309 AGGTCTGTGTCGCATATTAGACTT-TCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 106367 || ||||| ||| | || ||||| ||| || | || ||||| || || | || | Sbjct 230174 CGGCCTGTGACGCTTGTTTGACTTCTCG-GCCTCCGGTACAGGATAGAAGTTGATCTCGA 230116 Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 106427 ||| ||| | || ||| | || || |||| ||| ||||| | | | |||| Sbjct 230115 TGATCTTGTTCAAGTTCTTGACGATAACTTTGGTGACGTCAGCTAGTTTCTTAAAGTCAA 230056 Query 106428 AAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAG 106487 |||| || ||| |||||||| | || || || || |||| ||| ||||| | Sbjct 230055 AAGTCCG---CTCAGAGGTGACATACATGTTGAGTGCAATGGAAGCCAGATTACAAACGG 229999 Query 106488 CCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCG 106547 | ||||| | ||||| || | |||||||| || | |||| ||||| || | Sbjct 229998 CTACTTCATCATGGCTGGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTCTTGATGG 229939 Query 106548 TCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCG 106607 | |||| ||||| ||||| ||||| ||||||| || || || || |||||||| || | Sbjct 229938 TGCCCAGATTCTGATGGTTGGTCTTTCTGTTGCAGGCGTCTTTATAAAGCATGTATGGAG 229879 Query 106608 TCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCTGGTACAATGG 106667 | || || || ||||| |||| || ||||| | |||||| | ||| || | Sbjct 229878 TACCTGTTTCTGTCTGGGACTCGATGATTGCGTGCCACACCTGCTGAGCTTTCACCACAC 229819 Query 106668 CGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCG 106727 || ||| |||||| ||| || ||||| || ||||||||||| ||| | | Sbjct 229818 GCTTCACCCTCCCCTCCTTCTCATATGAGGTGTAAAGCTTCTCAAACTCCTC-CCCCCAG 229760 Query 106728 C-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCT--CCT 106784 | || || || || || | ||||| | |||||||| | || | || Sbjct 229759 CACTCATCCAGCCCAGGGCACTCATTAGGACACATCAGAGACCA--GTCCTGGTTGCTCT 229702 Query 106785 CAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAG 106844 | || | |||||||| ||||| || ||||||| || | ||||| ||||| | Sbjct 229701 CTACTCTTTTCATGAACAGGTCGGGGATCCACATGGCGTAGAAGAGGTCTCTGGCTCTCT 229642 Query 106845 CCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCAT 106903 ||| || | ||| ||| || | | ||| | ||| || | | ||| |||||| Sbjct 229641 GCTCCTCCTTTCCTGTGTT-CTTCTTCAGCTCCAAGAAGTCAAACACATCAAAGTGCCAG 229583 Query 106904 GGCTCAAGATAGACTGCGATAGATC----CCTTTCGACGCCCAGCTTGATTTACATAGCG 106959 |||||||| || | |||| | || ||||| | ||| | || | ||||| || Sbjct 229582 GGCTCAAGGTACATGGCGAAGGCTCCGGGCCTTTTG-TTTCCACCCTGGTCGACATAACG 229524 Query 106960 CGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCC 107019 ||| ||| ||| | || | ||||| || | || ||| | ||| | |||||||| || Sbjct 229523 CGCCGTGTTGTTGTACACTCTCAGCATGGGGACAAGACCGTTTGAGTTGCCATTTGTGCC 229464 Query 107020 CCGAATACGAGATTTAT-TGGCTCTCACATCATGGATG--TGC-ATCCCAATACCCCCAG 107075 ||| || | | | | ||| | | || | || ||| | || || || |||| Sbjct 229463 GGCAAT-GTAGCTCCCTGTCGATCTAATA-CA--GCTGACTGCTACGCCGATTCCTCCAG 229408 Query 107076 CCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCT 107135 | | || ||||| | || |||| | | ||||| |||| || || | || ||| | Sbjct 229407 CTGATTTGGAGATGAGGGCGCACTGCTTCAGAGTGTCATAAATGCCTTCAATGCTGTCGT 229348 Query 107136 CCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGA 107195 | || |||| | |||||||| ||||||| ||| || || || || |||||||||| Sbjct 229347 CTTTCATGGCTAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCTGCATTGAAGA 229288 Query 107196 GGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACA 107254 |||| |||| ||||| ||||| || | | |||| | || ||| ||||| | | | Sbjct 229287 GGGTAGGTGAGGCGTGTGTGAAC-CACTTCTCAGACAGCAGGTTGTAGGTCTCGATGGCT 229229 Query 107255 GAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGT 107311 | ||| ||||| |||||| |||| | || | ||| | ||||| || ||| Sbjct 229228 GCATCTATGTCGGATTTGTGGATTCCGACAGAAACTCTCATCAGCATGTGCTGTGGT 229172 >seq80 Length=1733396 Score = 113 bits (124), Expect = 5e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 |||||| ||| ||||||||| | ||| ||||| |||| |||| | ||| || || || Sbjct 121963 CTCATCTTTACTTGTGTACTCGACAATCTCTGTGCACAGGTTGCTAGACTTGATGGTGCC 122022 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || ||||| ||||| ||||| ||||||| || ||||||||||||||||| || || || Sbjct 122023 CAGATTCTGCTGGTTGCTCTTCCTGTTGCATGCGTCCTTGTAGAGCATGTATGGTGTACC 122082 Query 106612 CGTCTCCGTCTGTGACT 106628 || || ||||| |||| Sbjct 122083 AGTTTCTGTCTGAGACT 122099 >seq1459 Length=39823 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| |||||||| |||| | || || || || |||||| ||||| ||||| || || Sbjct 12989 GTGCAGACCCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCC 13048 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 117401 |||||||||| ||| | || || ||| ||||| ||||||||||| |||||||| Sbjct 13049 GCGCTTCTTCAGCCAGAAGATCGCAGCGAACGACCCCGAGAAGAAGATCCCCTCCAC 13105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589881491481840