Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq47 150 1e-30 seq251 122 7e-22 seq102 113 4e-19 seq2329 91.5 1e-12 seq179 87.8 1e-11 seq244 86.0 5e-11 >seq47 Length=2174667 Score = 150 bits (166), Expect = 1e-30 Identities = 443/679 (65%), Gaps = 3/679 (0%) Strand=Plus/Minus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 || || || |||||||| || | | || || || | || || ||| ||||| | Sbjct 29704 ACAGCATGTGAAAGAGCAAAGAGGACCCTGTCCTCCAGCACACAG-CCAGCATTGAGATC 29646 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 || || | || ||||| ||||| | | || |||| || ||||| ||||| || Sbjct 29645 GACTCTCTCTTCGAGGGTATTGACTTCTACACATCTATCTCAAGGGCTCGCTTTGAGGAG 29586 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 | | || || || || |||| | ||||||||||| | | | | |||| | Sbjct 29585 CTCAACGCAGAGCTTTTCAGGGGAACACTGGAACCAGTAGAGAAGGCTCTGCAAGATGCC 29526 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152 ||| | ||||| ||||| | ||||||||||| |||||||| || || || ||||| || Sbjct 29525 AAGCTGGATAAGTCCAAGATCCATGAAATTGTCCTTGTTGGGGGTTCCACGAGAATCCCC 29466 Query 552153 AAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAA 552211 ||||| | | | || || ||| ||| || || | | || | || | || | || Sbjct 29465 AAAATCCAAAAGCTCCTACAGGACTTCTTT-AACGGCAGAGAACTGAACAAGAGCATCAA 29407 Query 552212 TCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAAC 552271 || ||||| ||||| ||||| ||||| ||| | || || ||||| || ||| | || Sbjct 29406 CCCTGATGAAGCTGTGGCCTACGGTGCAGCAGTCCAGGCTGCTATCCTCATGGGAGATAC 29347 Query 552272 TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGA 552331 | || || | || || | | || | ||||| ||||||| ||||| || | || Sbjct 29346 TTCAGAGAACGTCCAGGATCTGCTGCTGCTGGATGTGGCTCCTCTGTCTCTGGGCATCGA 29287 Query 552332 AACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAA 552391 ||| | || || | ||||| ||| ||| | |||| || || || || | || | Sbjct 29286 AACCGCAGGTGGAGTAATGACACCTCTGATCAAACGAAACACCACGATCCCCTCCAAGCA 29227 Query 552392 ATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGA 552451 | | | || || || ||||||||||| || | | ||| || || | ||||| Sbjct 29226 GACACAGATCTTCTCAACATATTCAGATAACCAGCCAGGTGTGCTGATCCAGGTGTTTGA 29167 Query 552452 AGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTAT 552511 || || ||| | ||||| ||||| || | || || | || | | |||||| Sbjct 29166 GGGTGAGAGAGCCATGACTAAGGATAACAACCTCCTGGGAAAGTTCGAGCTCACAGGTAT 29107 Query 552512 TCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGG 552571 || |||||||| | || ||||| || | || || ||||| || || ||||| ||||| Sbjct 29106 CCCACCTGCTCCCAGAGGTGTACCCCAGGTGGAGGTCACTTTTGACATTGATGCAAATGG 29047 Query 552572 AATTTTGAATGTGACTGCT 552590 ||| |||| ||| ||||| Sbjct 29046 CATTCTGAACGTGTCTGCT 29028 >seq251 Length=796544 Score = 122 bits (134), Expect = 7e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| ||||| ||||| ||||| || || |||||||| || || || |||||||| |||| Sbjct 183938 ATGCTGTAATTACTGTGCCAGCCTACTTCAATGACTCTCAGCGCCAGGCTACTAAGGATG 183879 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| || |||| || |||||||| ||||| ||||||||||| ||||| || || Sbjct 183878 CTGGCACAATCTCTGGCCTCAATGTTCTGCGTATCATCAATGAACCAACTGCAGCAGCCA 183819 Query 550518 TTGCATATGGACTTGATAAA 550537 |||| |||||||| || ||| Sbjct 183818 TTGCCTATGGACTGGACAAA 183799 >seq102 Length=1484040 Score = 113 bits (124), Expect = 4e-19 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 ||||||| || || || || || || || ||||| || || |||||||| || ||||||| Sbjct 1219403 ATGCAGTTATCACGGTTCCTGCTTACTTCAATGATTCCCAGCGTCAAGCCACAAAAGATG 1219344 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| |||||||| |||||||| || || || |||||||| || || ||||| || Sbjct 1219343 CTGGAACCATTGCTGGGCTTAATGTGCTGCGCATCATCAATGAGCCCACGGCTGCAGCCA 1219284 Query 550518 TTGCATATGGACTTGATAAA 550537 |||| ||||| || || ||| Sbjct 1219283 TTGCCTATGGCCTGGACAAA 1219264 >seq2329 Length=24579 Score = 91.5 bits (100), Expect = 1e-12 Identities = 307/473 (65%), Gaps = 4/473 (1%) Strand=Plus/Plus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTA-AG 552172 || || || || || || || || || || ||||||| ||||| | || || | || Sbjct 10608 CAGGACATCGTCCTGGTGGGAGGCTCCACCCGAATTCCCAAAATCCAGAAACTGCTGCAG 10667 Query 552173 TTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTA 552232 || ||| ||||| | || | || | || | || ||||||||||| || || || Sbjct 10668 GATTTCTTT-AATGGCAGGGAACTGAACAAGAGCATCAACCCAGATGAGGCGGTGGCTTA 10726 Query 552233 TGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA-AACTGATGAAAAACTACAAAATA 552291 |||||| || | || || || || || |||| | |||| || || | || | Sbjct 10727 TGGTGCAGCTGTCCAGGCCGCCATCCTCACTGGTGACAACTC-TGGGAATGTCCAGGACC 10785 Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351 || | || | || || | ||||| || || ||| |||| |||| |||||| | |||| Sbjct 10786 TTCTGCTGCTGGACGTGGCGCCTCTGTCCCTGGGTATAGAGACAGCTGGAGGAGTCATGA 10845 Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGT 552411 | || || | | || || || || || |||| || | | || || || | Sbjct 10846 CATCCCTGATAAAACGCAACACCACAATCCCCACTAAACAAACCCAGGTGTTCAGCACCT 10905 Query 552412 ATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTA 552471 | || || || || ||| |||| || || | | |||||| |||||| | || | Sbjct 10906 ACTCCGACAACCAGCCTGGTGTTCTCATCCAGGTCTATGAAGGGGAAAGAGCCATGACCA 10965 Query 552472 AAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAG 552531 | || || || | || || | ||| | | ||| || ||||||||||| | |||| Sbjct 10966 AGGACAACAACCTGCTGGGCAGGTTTGAGCTGACAGGAATCCCTCCTGCTCCAAGAGGAG 11025 Query 552532 TACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTG 552584 | || || || || || || ||||| | || |||||||| |||||||||||| Sbjct 11026 TCCCACAGATCGAGGTCACCTTCGACGTGGACGCCAATGGTATTTTGAATGTG 11078 >seq179 Length=1057612 Score = 87.8 bits (96), Expect = 1e-11 Identities = 427/673 (63%), Gaps = 5/673 (1%) Strand=Plus/Minus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 || ||||| || || ||||| || | || || || | | || ||| || || | Sbjct 890280 ACAGCTTGTGAGAGGGCCAAGAGAACCCTGTCGTCCAGCTCCCAGGCCAGCATCGAGATT 890221 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 ||||| | || ||||| ||||| ||| | || | || | || || ||||| || Sbjct 890220 GATTCTCTGTTCGAGGGCATTGACTATTACACCTCCATCACCAGAGCTCGCTTTGAGGAG 890161 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 | || | || || || ||| |||| | || || || || ||| | || || | Sbjct 890160 CTGTGCACCGACCTGTTCAGAGGAACATTGGAGCCGGTGGAGAAAGCCCTGAGGGACGCC 890101 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152 || || || || | | | ||||| || || ||||| || || || || |||| || Sbjct 890100 AAAATGGACAAGGCACAGATCCATGACATCGTCCTTGTGGGAGGCTCCACCCGAATCCCC 890041 Query 552153 AAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAA 552211 ||||| | || || | || || ||| ||||| | || | || | || | || Sbjct 890040 AAAATCCAGAAACTGCTGCAGGATTTCTTT-AATGGCAGGGAACTGAACAAGAGCATCAA 889982 Query 552212 TCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA-AA 552270 ||||||||||| || || || ||||| || | || || || || || |||| | || Sbjct 889981 CCCAGATGAGGCGGTGGCTTACGGTGCAGCTGTCCAGGCCGCCATCCTCACTGGTGACAA 889922 Query 552271 CTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAG 552330 || || || | || | || | || | || || | || | || || ||| ||| Sbjct 889921 CTC-TGGGAATGTTCAGGACCTTCTGCTGTTGGACGTGGCGCCATTGTCCCTGGGTATAG 889863 Query 552331 AAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAA 552390 | |||| |||||| | ||||| || || | | || || || || || |||| Sbjct 889862 AGACAGCTGGAGGAGTCATGACATCCCTGATAAAACGCAACACCACAATCCCCACTAAAC 889803 Query 552391 AATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTG 552450 || | | || || || || || || || || ||| |||| || || | | | Sbjct 889802 AAACCAG-GTGTTCAGCACCTACTCCGACAACCAGCCTGGTGTTCTCATCCAGGTCTACG 889744 Query 552451 AAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTA 552510 |||| |||||| | ||||| || || || | ||| || | ||| | | ||| | Sbjct 889743 AAGGGGAAAGAGCCATGACTAAGGACAACAACCTACTGGGCAGGTTTGAGCTGACAGGAA 889684 Query 552511 TTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATG 552570 | ||||||||||| || ||||| || || || || || || ||||| | || ||||| | Sbjct 889683 TCCCTCCTGCTCCACGAGGAGTCCCACAGATCGAGGTCACCTTCGACGTGGACGCCAACG 889624 Query 552571 GAATTTTGAATGT 552583 | ||||||||||| Sbjct 889623 GGATTTTGAATGT 889611 >seq244 Length=825062 Score = 86.0 bits (94), Expect = 5e-11 Identities = 306/473 (65%), Gaps = 4/473 (1%) Strand=Plus/Plus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTA-AG 552172 || || || || || || || || || || ||||||| ||||| | || || | || Sbjct 711034 CAGGACATCGTCCTGGTGGGAGGCTCCACCCGAATTCCCAAAATCCAGAAACTGCTGCAG 711093 Query 552173 TTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTA 552232 ||| ||| ||||| | || | || | || | || ||||||||||| || || || Sbjct 711094 GACTTCTTT-AATGGCAGGGAACTGAACAAGAGCATCAACCCAGATGAGGCGGTGGCTTA 711152 Query 552233 TGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA-AACTGATGAAAAACTACAAAATA 552291 ||||| || | || || || || || |||| | |||| | || | || | Sbjct 711153 CGGTGCAGCTGTCCAGGCCGCCATCCTAACTGGTGACAACTCTAGGAATG-TCCAGGACC 711211 Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351 || | || | || || | ||||| || || ||| |||| |||| |||||| | |||| Sbjct 711212 TTCTGCTGCTGGACGTGGCGCCTCTGTCCCTGGGTATAGAGACAGCTGGAGGAGTCATGA 711271 Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGT 552411 | || || | | || || || || || |||| || | | || || || | Sbjct 711272 CATCCCTGATAAAACGCAACACCACAATCCCCACTAAACAAACCCAGGTGTTCAGCACCT 711331 Query 552412 ATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTA 552471 | || || || || ||| |||| || || | | |||||| |||||| | || | Sbjct 711332 ACTCCGACAACCAGCCTGGTGTTCTCATCCAGGTCTATGAAGGGGAAAGAGCCATGACCA 711391 Query 552472 AAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAG 552531 | || || || | || || | ||| | | ||| || ||||||||||| | |||| Sbjct 711392 AGGACAACAACCTGCTGGGCAGGTTTGAGCTGACAGGAATCCCTCCTGCTCCAAGAGGAG 711451 Query 552532 TACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTG 552584 | || || || || || || ||||| | || |||||||| |||||||||||| Sbjct 711452 TCCCACAGATCGAGGTCACCTTCGACGTGGACGCCAATGGTATTTTGAATGTG 711504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028583857188340