Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq285 143 2e-29 seq159 98.7 8e-16 >seq285 Length=713875 Score = 143 bits (158), Expect = 2e-29 Identities = 129/162 (80%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 ||||| |||| ||| || |||||||| || || || | ||||||||||| ||| || || Sbjct 56041 AGCCCTGTGATGTGTGCGATCATGTAGGTAAGAAGCGCGTAGCTGGCGACGTTGAAAGGC 56100 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || ||||| |||||||| ||||| | |||||| ||||| || || ||||| ||||| | | Sbjct 56101 ACGCCGAGGCCCATGTCACCCGAGCGCTGGTACAGCTGGCAGGACAGCTCGCCGTCACAC 56160 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATG 30030 ||||| |||||||| | || |||||| || || || |||||| Sbjct 56161 ACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCATG 56202 Score = 136 bits (150), Expect = 3e-27 Identities = 131/168 (78%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 ||||| ||||||||||| || || |||||||||||||| || ||||| || || ||||| Sbjct 56651 CATGTTTGTGTACTCTGCACCAAAGTGCCTCCACTGGAATCCATACACAGGACCGAGGTC 56710 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 ||||| ||||| | ||| || ||||| | ||||| | ||| |||||||| || Sbjct 56711 GCCCTCCTCCCTCTCTGTGAACCCGAGGTTGTCGAGGAAGTCCCGGGAGCCGTTGGCATC 56770 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 ||| ||||| ||||| ||||| |||||||| |||| ||| || ||||| Sbjct 56771 CCAAATCTTCACCCCTTTCTCCGAGAGCTCCTTGGCGTTCGTCGACCC 56818 >seq159 Length=1183618 Score = 98.7 bits (108), Expect = 8e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 111860 ACTCTGGCAGTAGACGATATCTCTCTAGACTTTTCTATGGGAGAAAAGTGTCGCACGCAA 111919 |||||||||| ||||| ||| | ||| |||| | | |||||||| ||||||||| ||| Sbjct 942206 ACTCTGGCAGCAGACGGTATTTATCTGGACTGATTTCAGGGAGAAATGTGTCGCACTCAA 942147 Query 111920 ATTGCGTCGACACGTGAGTGACAAACAGCCTCTTTGTCCCCGGGCTCTCCATGAGCTCC 111978 | ||| || | | || ||||||||||| ||| | |||||| ||||||||| | |||| Sbjct 942146 ACTGCTTCAAGATTTGTGTGACAAACAGTCTCCTGCTCCCCGAGCTCTCCATCATCTCC 942088 Score = 96.9 bits (106), Expect = 3e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 112107 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 112166 || |||||||||||| | ||| ||||||| | | |||||| || || || ||||| || Sbjct 940314 CTGCCTGCTGAGGACGATGTTGATCCTGTTGTTTAAAGGTCTGTTTTTCTCCGGGATTGA 940255 Query 112167 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 |||||| ||||| || ||||| |||||||| |||||||| ||| Sbjct 940254 GAACCACGTCTTCCTGCCCATGATCACCACATTCTGCTTACCT 940212 Score = 87.8 bits (96), Expect = 1e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 112261 AGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACACG 112320 ||||| | |||||||||||||| | |||||| ||||||| |||| ||| |||||||| Sbjct 938398 AGTCTAACGGGATGCCACGGCAGGTTTCCGTTCATCCCGATCCCCAGGTCAGGACACACC 938339 Query 112321 GCCACGATACCGTTCA 112336 |||||||||||||||| Sbjct 938338 GCCACGATACCGTTCA 938323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408550538956418