Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq349 96.9 3e-15 >seq349 Length=568042 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || |||| || | || || ||| ||| || || || ||||| || || Sbjct 322728 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 322669 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || |||| ||||||||| ||||| ||||| | ||| ||||| | ||| Sbjct 322668 GAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 322609 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || |||||||||||| ||||| || ||| | | | || | |||||| Sbjct 322608 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCAC 322549 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || ||||| || || | || || ||||| |||||||| Sbjct 322548 CTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 322501 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || |||| || | || || ||| ||| || || || ||||| || || Sbjct 323184 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 323125 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || |||| ||||||||| ||||| ||||| | ||| ||||| | ||| Sbjct 323124 GAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 323065 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || |||||||||||| ||||| || ||| | | | || | |||||| Sbjct 323064 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCAC 323005 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || ||||| || || | || || ||||| |||||||| Sbjct 323004 CTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 322957 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || |||| || | || || ||| ||| || || || ||||| || || Sbjct 327201 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 327142 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| |||| ||||||||| ||||| ||||| | ||| ||||| | |||| Sbjct 327141 AGGGTGCGGCCGTCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGA 327082 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || ||| | | | || | ||||||| Sbjct 327081 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACC 327022 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| || || | || || ||||| |||||||| Sbjct 327021 TCTAGGGTGATTGTTTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 326975 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || |||| || | || || ||| ||| || || || ||||| || || Sbjct 322500 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 322441 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || |||| |||| ||||||||| ||||| ||||| | ||| ||||| | ||| Sbjct 322440 GAGGGTGCGGCCGTCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 322381 Query 48659 AACGCCCTCCTTGTC 48673 || |||||||||||| Sbjct 322380 AATGCCCTCCTTGTC 322366 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || |||| || | || || ||| ||| || || || ||||| || || Sbjct 322956 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 322897 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || |||| ||||||||| ||||| ||||| | ||| ||||| | ||| Sbjct 322896 GAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGGGG 322837 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || |||||||||||| ||||| || ||| | | | || | |||||| Sbjct 322836 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTTGGCTCCAC 322777 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || ||||| || || | || || || || |||||||| Sbjct 322776 CTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 322729 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || |||| || | || || ||| ||||| || || ||||| || || Sbjct 326974 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGA 326915 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || |||| ||||||||| ||||| ||||| | ||| ||||| | ||| Sbjct 326914 GAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 326855 Query 48659 AACGCCCTCCTTGTC 48673 || |||||||||||| Sbjct 326854 AATGCCCTCCTTGTC 326840 Score = 84.2 bits (92), Expect = 2e-11 Identities = 164/241 (68%), Gaps = 1/241 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || |||| || | || || ||| ||| || || || ||||| || || Sbjct 326746 GCCTCCCCTCAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 326687 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || |||| |||||| |||||||| ||||| | ||| || || | ||| Sbjct 326686 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGG 326627 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || |||||||||||| ||||| || ||| | | | || | |||||| Sbjct 326626 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTTGGCTCCAC 326567 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTGTGTACGTG 48778 ||| | || || || || || || | || || ||||| |||||||| || || || || Sbjct 326566 CTCTAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT-GTTTGGACCTG 326508 Query 48779 T 48779 | Sbjct 326507 T 326507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380875081711518