Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq179 140 2e-27 seq47 140 2e-27 seq2329 122 6e-22 seq251 113 3e-19 seq244 113 3e-19 seq349 87.8 1e-11 >seq179 Length=1057612 Score = 140 bits (154), Expect = 2e-27 Identities = 367/550 (67%), Gaps = 10/550 (2%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 |||||||| || || | || || || | | ||||| | |||| ||| |||| ||| Sbjct 891056 GCAATTGGGATCGACCTGGGCACCACCTTCTCCTGTGTTGGAGTTTTCCAACATGGAAAA 890997 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 |||||||| |||||||| ||||| ||||| || || || || ||||| | || ||| Sbjct 890996 GTAGAAATCATTGCCAACGACCAGGGTAACAGGACCACCCCCAGTTATGTAGCATTCACT 890937 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCT-AATCCTGTTAA 474507 || || || || ||||| ||||| || || | | || || ||| || || || Sbjct 890936 GACACAGAGAGGCTCATTGGGGATGCAGC-CAAGAACCAGGTGGCTCTGAACCCCAGCAA 890878 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACT-GTCCAAT 474566 ||| | |||||||| || ||| ||||||| | || | |||||| ||| | || || Sbjct 890877 CACTGTGTTTGATGCCAAGAGACTGATTGGAAGAAAGATGGATGAT-CCAGTGGTGCAGG 890819 Query 474567 CTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA- 474625 |||| ||| || ||||| || || ||| | | | ||| || | || | || || Sbjct 890818 CTGACATGAAGCACTGGCCCTTCAATGTGGTCACAGATGGAGGGAGGCCCAAAATTCAAG 890759 Query 474626 -GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTT 474684 | | |||| ||| || | ||| || | ||||| | ||||| || ||||| | Sbjct 890758 TGGAGTACA--AAGGGGAGAACAAATCCTTCTACCCGGAGGAGATTTCCTCCATGGTCCT 890701 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 | || ||||| | | || ||| | ||||| || ||| | || | | ||||| | Sbjct 890700 GGTGAAGATGAAGGAGATTGCTGAG-GCCTATCTCGGTCAAAAGGTGTCCAACGCAGTCA 890642 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | || || || || || || ||||| ||||| || || || ||||||||||| || | Sbjct 890641 TCACAGTCCCGGCGTACTTCAATGACTCTCAGCGGCAGGCGACTAAAGATGCAGGCGTCA 890582 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 | ||||| || ||||| | | || || || || || |||||||| || | || || | Sbjct 890581 TCGCAGGACTGAATGTCCTGAGGATCATCAACGAGCCCACAGCAGCTGCCATCGCGTACG 890522 Query 474864 GTCTTGATAA 474873 || | || || Sbjct 890521 GTTTGGACAA 890512 >seq47 Length=2174667 Score = 140 bits (154), Expect = 2e-27 Identities = 416/633 (66%), Gaps = 14/633 (2%) Strand=Plus/Minus Query 475548 TTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAAT 475607 |||| | || ||||| || || || ||||| | | || ||| |||||||| | Sbjct 29653 TTGAGATCGACTCTCTCTTCGAGGGTATTGACTTCTACACATCTATCTCAAGGGCTCGCT 29594 Query 475608 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCA 475667 |||| || | | || || || || |||| | ||||| || || | | ||| Sbjct 29593 TTGAGGAGCTCAACGCAGAGCTTTTCAGGGGAACACTGGAACCAGTAGAGAAGGCTCTGC 29534 Query 475668 GAGATTCTAAACTTGACAAATCACAAG-TCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 |||| | || || || || || |||| ||||||||||||| ||||| || ||||| || Sbjct 29533 AAGATGCCAAGCTGGATAAGTC-CAAGATCCATGAAATTGTCCTTGTTGGGGGTTCCACG 29475 Query 475727 AGAATTCCAAAAATAAGAGAAATGCT--TTCATCATAT-TTTAATGGTAAAAAGTTAAAT 475783 ||||| || ||||| ||| ||| | || | | ||||| || | | | | || Sbjct 29474 AGAATCCCCAAAATCC---AAAAGCTCCTACAGGACTTCTTTAACGGCAGAGAACTGAAC 29418 Query 475784 GAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTT- 475842 | || | || |||||||||||||| || || || || || ||||| || ||||| | Sbjct 29417 AAGAGCATCAACCCTGATGAAGCTGTGGCCTACGGTGCAGCAGTCCAGGCTGCTATCCTC 29358 Query 475843 ATC--AGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTT 475900 || || | ||||| ||| | | || | | || | || || |||| || Sbjct 29357 ATGGGAGATACTTCAGA---GAACGTCCAGGATCTGCTGCTGCTGGATGTGGCTCCTCTG 29301 Query 475901 TCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCT 475960 || | || | ||||| | || || | ||||| ||| || | |||| || | Sbjct 29300 TCTCTGGGCATCGAAACCGCAGGTGGAGTAATGACACCTCTGATCAAACGAAACACCACG 29241 Query 475961 ATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACC 476020 ||||| | ||| | || | | || || || ||||| ||||| || || ||| Sbjct 29240 ATCCCCTCCAAGCAGACACAGATCTTCTCAACATATTCAGATAACCAGCCAGGTGTGCTG 29181 Query 476021 ATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT 476080 ||||| | ||||| ||||| ||| | ||||| ||||| ||| || |||| || Sbjct 29180 ATCCAGGTGTTTGAGGGTGAGAGAGCCATGACTAAGGATAACAACCTCCTGGGAAAGTTC 29121 Query 476081 AATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGAT 476140 | || |||||| || |||||||||||||| || || || | || || |||||||| Sbjct 29120 GAGCTCACAGGTATCCCACCTGCTCCCAGAGGTGTACCCCAGGTGGAGGTCACTTTTGAC 29061 Query 476141 ATTGATGCAAATGGTATTCTTAATGTTACTGCT 476173 |||||||||||||| ||||| || || ||||| Sbjct 29060 ATTGATGCAAATGGCATTCTGAACGTGTCTGCT 29028 Score = 118 bits (130), Expect = 7e-21 Identities = 360/549 (66%), Gaps = 13/549 (2%) Strand=Plus/Minus Query 474330 CAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAG 474389 ||||||| |||||| | ||||| || || |||||| | |||| || |||| |||| Sbjct 30476 CAATTGGCATTGATCTTGGAACCACCTATTCTTGTGTTGGGGTTTTCCAGCATGGCAAAG 30417 Query 474390 TAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTG 474449 | || || || ||||| ||||| || || || || || || ||||| | || |||| Sbjct 30416 TGGAGATCATCGCCAACGACCAGGGAAACAGGACCACTCCCAGCTATGTGGCCTTCACTG 30357 Query 474450 AAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATA 474509 |||| || || |||||||||||||| || | || | || || || || | Sbjct 30356 AAACCGAGAGGCTCATTGGAGATGCTGCCAAGAACCAGGTGGCCATGAACCCCACCAACA 30297 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCA--CTGTCCAATC 474567 || | |||||||| ||| | | || || | || || | | |||| |||||| || Sbjct 30296 CTGTCTTTGATGCCAAACGGCTCATCGGGAGAAAGTTCAACG--ACCAAGTTGTCCAGTC 30239 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATA--TATAGAA 474625 ||| ||| | |||||||| || |||| | || | || |||||| | | || Sbjct 30238 TGACATGAAACTCTGGCCTTTCAAAGTGAACAGTGATAACGGAAAACCAAAAGTCCAGGT 30179 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | | || | ||| || || || || | ||||| | ||||| || ||||| | Sbjct 30178 GGAGTATA--AAGGGGAGACCAAGGCCTTCTTCCCGGAGGAGATTTCCTCCATGGTGCTG 30121 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744 | || ||||| | | || ||| | || || ||||| || | ||||||| || Sbjct 30120 GTTAAGATGAAGGAGATTGCTGAG-GCCTACCTGGGACAGACGGTGTCCAATGCAGTCAT 30062 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 || |||||||| ||||| ||||| || || | ||||| || || || || || || Sbjct 30061 CACAGTTCCAGCTTATTTCAATGACTCCCAGAGGCAAGCCACCAAGGACGCTGGTGTGAT 30002 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 | || || |||||| | | || || || || |||||||| || |||| || || Sbjct 30001 CTCTGGACTGAATGTTCTGAGGATCAT---CGAGCCCACAGCAGCAGCCATTGCGTACGG 29945 Query 474865 TCTTGATAA 474873 |||||||| Sbjct 29944 CCTTGATAA 29936 >seq2329 Length=24579 Score = 122 bits (134), Expect = 6e-22 Identities = 363/550 (66%), Gaps = 10/550 (2%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||| || ||||| | || || || ||| |||||| | ||| || |||| ||| Sbjct 9630 GCAATCGGCATTGACCTGGGCACCACCTACTCTTGTGTGGGGATTTTCCAGCATGGAAAA 9689 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 |||||||| || ||||| ||||| ||||| || || || || ||||| | || ||| Sbjct 9690 GTAGAAATTATCGCCAACGACCAGGGTAACAGGACCACCCCCAGTTATGTGGCATTCACT 9749 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCT-AATCCTGTTAA 474507 || || || || ||||| ||||| || || | | || || ||| || || || Sbjct 9750 GACACAGAGAGGCTCATTGGGGATGCAGC-CAAGAACCAGGTGGCTCTGAACCCCAGCAA 9808 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACT-GTCCAAT 474566 ||| | |||||||| || ||| ||||||| | || | |||||| ||| | || || Sbjct 9809 CACTGTGTTTGATGCAAAGAGACTGATTGGAAGAAAGATGGATGAT-CCAGTGGTGCAGG 9867 Query 474567 CTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA- 474625 |||| ||| || ||||| || || ||| | | ||| || | || | || || Sbjct 9868 CTGACATGAAGCACTGGCCCTTCAATGTGGTCGGAGATGGAGGGAGGCCCAAAATTCAAG 9927 Query 474626 -GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTT 474684 | | |||| |||||| | ||| || | || || | |||| || ||||| | Sbjct 9928 TGGAGTACA--AAGGTGAGAACAAATCCTTCTACCCTGAGGAGGTTTCCTCCATGGTCCT 9985 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 | || ||||| | | || ||| | ||||| || ||| | || | | ||||| | Sbjct 9986 GGTGAAGATGAAGGAGATTGCTGAG-GCCTATCTCGGTCAAAAGGTGTCCAACGCAGTCA 10044 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | || || || || || || || || ||||| || || || ||||||||||| || | Sbjct 10045 TCACAGTCCCGGCGTACTTCAACGACTCTCAGCGGCAGGCGACTAAAGATGCAGGCGTCA 10104 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 | ||||| || ||||| | | || || || || || |||||||| || | || || | Sbjct 10105 TCGCAGGACTGAATGTCCTGAGGATCATCAACGAGCCCACAGCAGCTGCCATCGCGTACG 10164 Query 474864 GTCTTGATAA 474873 || | || || Sbjct 10165 GTTTGGACAA 10174 >seq251 Length=796544 Score = 113 bits (124), Expect = 3e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| ||||||||||| ||||| || || ||||| ||||| || || || ||||| |||| Sbjct 183938 ATGCTGTAATTACTGTGCCAGCCTACTTCAATGACTCTCAGCGCCAGGCTACTAAGGATG 183879 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || | ||| | || || |||||| | ||||| || ||||||||||| ||||| || Sbjct 183878 CTGGCACAATCTCTGGCCTCAATGTTCTGCGTATCATCAATGAACCAACTGCAGCAGCCA 183819 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 |||| ||||| || || || || Sbjct 183818 TTGCCTATGGACTGGACAAAAA 183797 >seq244 Length=825062 Score = 113 bits (124), Expect = 3e-19 Identities = 361/550 (66%), Gaps = 10/550 (2%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||||||||| || | || || || | ||||| | |||| ||| |||| ||| Sbjct 710056 GCAATTGGTATCGACCTGGGCACCACCTTTTCCTGTGTCGGAGTTTTCCAACATGGAAAA 710115 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 |||||||| || ||||| ||||| ||||| || || || || ||||| | || ||| Sbjct 710116 GTAGAAATCATCGCCAACGACCAGGGTAACAGGACCACCCCCAGTTATGTAGCATTCACT 710175 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCT-AATCCTGTTAA 474507 || || || || ||||| ||||| || || | | || || ||| || || || Sbjct 710176 GACACAGAGAGGCTCATTGGGGATGCAGC-CAAGAACCAGGTGGCTCTGAACCCCAGCAA 710234 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACT-GTCCAAT 474566 ||| | |||||||| || ||| ||||||| | || | |||||| ||| | || || Sbjct 710235 CACTGTGTTTGATGCCAAGAGACTGATTGGAAGAAAGATGGATGAT-CCAGTGGTGCAGG 710293 Query 474567 CTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA- 474625 |||| ||| || ||||| || || ||| | | ||| || | || | || || Sbjct 710294 CTGACATGAAGCACTGGCCCTTCAATGTGGTCGGAGATGGAGGGAGGCCCAAAATTCAAG 710353 Query 474626 -GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTT 474684 | | |||| |||||| | ||| || | || || | |||| || ||||| | Sbjct 710354 TGGAGTACA--AAGGTGAGAACAAATCCTTCTATCCTGAGGAGGTTTCCTCCATGGTCCT 710411 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 | || ||||| | | || ||| | ||||| || ||| | || | ||||| | Sbjct 710412 GGTGAAGATGAAGGAGATTGCTGAG-GCCTATCTCGGTCAAAAGGTGTCCAGCGCAGTCA 710470 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | || || || || || || || || ||||| || || || |||||||| || || | Sbjct 710471 TCACAGTCCCGGCGTACTTCAACGACTCTCAGCGGCAGGCGACTAAAGACGCAGGCGTCA 710530 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 | ||||| || ||||| | | || || || || || |||||||| || | || || | Sbjct 710531 TCGCAGGACTGAATGTCCTGAGGATCATCAACGAGCCCACAGCAGCTGCCATCGCGTACG 710590 Query 474864 GTCTTGATAA 474873 || | || || Sbjct 710591 GTTTGGACAA 710600 >seq349 Length=568042 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || ||||| ||||||||||| || | || ||||| || ||||| || ||||| Sbjct 322884 ATCTTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTT 322825 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| |||||| |||||| || || | | || ||||| || Sbjct 322824 GTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGAT 322765 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || ||||| ||||| ||||| || || Sbjct 322764 TGTTTTGCCAGTGAGGGTCTTGACGAAGATCTG 322732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267601577922968