Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5694 82.4 4e-11 seq86 82.4 4e-11 >seq5694 Length=14491 Score = 82.4 bits (90), Expect = 4e-11 Identities = 208/311 (67%), Gaps = 4/311 (1%) Strand=Plus/Plus Query 25921 CTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCT 25980 ||| ||| | | ||| || | || || |||||||| || || || | ||||| ||||| Sbjct 391 CTCTACTCTTTTCATGAACAGGTCGGGGATCCACATGGCGTAGAAGAGGTCTCTGGCTCT 450 Query 25981 CATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCC 26039 | || || ||||| ||| ||||| || || || ||||| ||||| | ||| |||||| Sbjct 451 CTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAAGAAGTCAAACACATCAAAGTGCC 509 Query 26040 ATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATC 26099 | || || | || || || || || ||||| |||||| || || || || | Sbjct 510 AGGGCTCAAGGTACATGGCGAAGGCTCCGGGCCTTTTGTTTCCACCCTGGTCGACATAAC 569 Query 26100 TTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGC 26159 || || | ||| | ||| ||| ||| || || | || |||| || ||||||| Sbjct 570 GCGCCGTGTTGTTGTACACTCTCAGCATGGGGACAAGACCGTTTGAGTTGCCATTTGTGC 629 Query 26160 TATGAATCTTGGATCCTGTCGATCTAATATCG-TGAGCATGAATACCGATTCCACCAGCC 26218 ||| | | ||||||||||||||| | ||| | | |||||||| ||||| Sbjct 630 CGGCAATGTAGCTCCCTGTCGATCTAATACAGCTGA-CTGCTACGCCGATTCCTCCAGCT 688 Query 26219 CATTTTGAAAT 26229 |||| || || Sbjct 689 GATTTGGAGAT 699 >seq86 Length=1688118 Score = 82.4 bits (90), Expect = 4e-11 Identities = 208/311 (67%), Gaps = 4/311 (1%) Strand=Plus/Minus Query 25921 CTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCT 25980 ||| ||| | | ||| || | || || |||||||| || || || | ||||| ||||| Sbjct 229703 CTCTACTCTTTTCATGAACAGGTCGGGGATCCACATGGCGTAGAAGAGGTCTCTGGCTCT 229644 Query 25981 CATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCC 26039 | || || ||||| ||| ||||| || || || ||||| ||||| | ||| |||||| Sbjct 229643 CTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAAGAAGTCAAACACATCAAAGTGCC 229585 Query 26040 ATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATC 26099 | || || | || || || || || ||||| |||||| || || || || | Sbjct 229584 AGGGCTCAAGGTACATGGCGAAGGCTCCGGGCCTTTTGTTTCCACCCTGGTCGACATAAC 229525 Query 26100 TTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGC 26159 || || | ||| | ||| ||| ||| || || | || |||| || ||||||| Sbjct 229524 GCGCCGTGTTGTTGTACACTCTCAGCATGGGGACAAGACCGTTTGAGTTGCCATTTGTGC 229465 Query 26160 TATGAATCTTGGATCCTGTCGATCTAATATCG-TGAGCATGAATACCGATTCCACCAGCC 26218 ||| | | ||||||||||||||| | ||| | | |||||||| ||||| Sbjct 229464 CGGCAATGTAGCTCCCTGTCGATCTAATACAGCTGA-CTGCTACGCCGATTCCTCCAGCT 229406 Query 26219 CATTTTGAAAT 26229 |||| || || Sbjct 229405 GATTTGGAGAT 229395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252998471865950