Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq86 199 5e-46 seq5694 129 7e-25 seq1459 86.0 7e-12 >seq86 Length=1688118 Score = 199 bits (220), Expect = 5e-46 Identities = 958/1492 (64%), Gaps = 36/1492 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| | ||| | || | |||| |||||| ||||| ||| | | | Sbjct 229173 CCACAGCACATGCTGATGAGAGTTTCTGTCGGAATCCACAAATCCGACATAGATGCAGCC 229232 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || | |||| | | || ||||| ||||| |||| |||||||| Sbjct 229233 ATCGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACACACGCCTCACCTACCCTCTT 229291 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||||| || || || || ||| ||||||| |||||||| | |||| || || || Sbjct 229292 CAATGCAGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTAGCCATGAAAGACGA 229351 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | || || |||| ||||| | | |||| || | ||||| || | ||||| Sbjct 229352 CAGCATTGAAGGCATTTATGACACTCTGAAGCAGTGCGCCCTCATCTCCAAATCAGCTGG 229411 Query 75451 GGGTATTGGGAT-GCA--CATCCATGATGTGAGAGCCA-ATAAATCTCGTATTCGGGGGA 75506 || || || | ||| || | || | | ||| | | | | || ||| || | Sbjct 229412 AGGAATCGGCGTAGCAGTCAGC--TG-TATTAGATCGACAGGGAGCTAC-ATTGCCGGCA 229467 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 ||||||| | ||| | ||| || | || ||||| | || | ||| ||| ||||| | Sbjct 229468 CAAATGGCAACTCAAACGGTCTTGTCCCCATGCTGAGAGTGTACAACAACACGGCGCGTT 229527 Query 75567 ATGTAAATCAAGCGGGGCGTCGCAAGG----GGTCCATCGCGGTCTACTTGGAACCATGG 75622 |||| | || | | || | |||| | || |||| | ||| | || || ||| Sbjct 229528 ATGTCGACCAGG-GTGGAAACAAAAGGCCCGGAGCCTTCGCCATGTACCTTGAGCCCTGG 229586 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 || ||| | | || ||| | ||| | | || ||| ||| | || ||| | Sbjct 229587 CACTTTGATGTGTTTGACTTCTTGGAGCTGAAGAAG-AACACAGGAAAGGAGGAGCAGAG 229645 Query 75682 GTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG- 75740 ||||| ||||| | || ||||||| || ||||| |||||||| | || ||| Sbjct 229646 AGCCAGAGACCTCTTCTACGCCATGTGGATCCCCGACCTGTTCATGAAAAGAGTAGAGAG 229705 Query 75741 -AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGT 75798 | || | |||||||| | ||||| | || || || || || || | Sbjct 229706 CAACCAGGAC--TGGTCTCTGATGTGTCCTAATGAGTGCCCTGGGCTGGATGAGTGCTGG 229763 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858 ||| ||||||||||| || ||||| ||||| ||||||| || | || ||| Sbjct 229764 GGG-GAGGAGTTTGAGAAGCTTTACACCTCATATGAGAAGGAGGGGAGGGTGAA-GCGTG 229821 Query 75859 T-GTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917 | || ||| | || ||| | || || || | || ||||| || || || || | Sbjct 229822 TGGTGAAAGCTCAGCAGGTGTGGCACGCAATCATCGAGTCCCAGACAGAAACAGGTACTC 229881 Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977 |||| |||||||| || || || || |||| |||| ||||| ||||| |||| || | Sbjct 229882 CATACATGCTTTATAAAGACGCCTGCAACAGAAAGACCAACCATCAGAATCTGGGCACCA 229941 Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037 |||||||| || || ||||| ||||| | || ||||| | ||||| || | Sbjct 229942 TCAAGAGCAGCAACCTCTGCACAGAAATCGTTGAATACACCAGCCATGATGAAGTAGCCG 230001 Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTG 76097 |||| ||| |||| || || || || | |||||||| ||| || ||||||| Sbjct 230002 TTTGTAATCTGGCTTCCATTGCACTCAACATGTATGTCACCTCTGAG---CGGACTTTTG 230058 Query 76098 ATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTG 76157 | | | | ||||| ||| |||| || || | ||| || | ||| |||| | Sbjct 230059 ACTTTAAGAAACTAGCTGACGTCACCAAAGTTATCGTCAAGAACTTGAACAAGATCATCG 230118 Query 76158 ACAGAAATTTTTATCCCGTTGAGACTGCGCGA-AAGTCTAATATGCGACACAGACCTATT 76216 | | || || ||||| || | || ||| ||||| || | ||| ||||| || ||| Sbjct 230119 AGATCAACTTCTATCCTGTACCGGAGGC-CGAGAAGTCAAACAAGCGTCACAGGCCGATT 230177 Query 76217 GGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCA 76276 ||| | || ||||| ||| | || || | || || | || ||| | ||||| Sbjct 230178 GGTATCGGCGTTCAGGGTTTGGCTGACGCCTTCATCCTCATGCGGTACCCGTTTGAAAGC 230237 Query 76277 GATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAG 76336 || ||| || | |||| || |||||||| || || || |||| |||| ||| Sbjct 230238 CCAGAGGCCCAGTTGCTGAACATTCACATCTTTGAGACGATCTACTACGCCGCCCTTGAG 230297 Query 76337 GCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCG 76396 || || || || |||||| | | || | || ||||| | || || ||||| | Sbjct 230298 GCAAGCTGCGAGCTGGCTGCCGAGCTCGGCCCGTACGAGACTTACGAAGGGTCTCC--GG 230355 Query 76397 TC-CCAAGGGG-TGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTACGAC 76453 || ||||||| | || |||| || ||||||| || ||| || | | | | ||| Sbjct 230356 TCAGCAAGGGGATTCTGCAGTACGACATGTGGG-AGAAGAAGCCCACCGACCTGTTGGAC 230414 Query 76454 TGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCA 76513 ||| | | || ||||| ||| | | || | | ||||| || || | || Sbjct 230415 TGGAAGCTGCTGAAGGAGAAGATCGCCAAACATGGCGTGAGGAACAGCCTGCTGCTCGCC 230474 Query 76514 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATAC 76573 || ||||| || |||||||||||||| ||| |||| || || || | | | || | ||| Sbjct 230475 CCGATGCCCACCGCCTCCACCGCACAGATCCTGGGCAACAACGAGTCCATCGAGGCCTAC 230534 Query 76574 ACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCAC 76633 || | ||||||||| | ||| ||| | || |||||| || |||||| || Sbjct 230535 ACCAGCAACATCTACACCCGCAGAGTCCTGTCTGGAGAGTTTCAGATCGTCAACCCTCAT 230594 Query 76634 CTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 76685 || |||| ||||| | | ||| || || ||| | |||| |||||| ||| Sbjct 230595 CTGCTCAAAGACCTGACGGAGAAGGGGCTGTGGAGCGAGGAGATGAAGAATC 230646 >seq5694 Length=14491 Score = 129 bits (142), Expect = 7e-25 Identities = 589/912 (65%), Gaps = 28/912 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| | ||| | || | |||| |||||| ||||| ||| | | | Sbjct 921 CCACAGCACATGCTGATGAGAGTTTCTGTCGGAATCCACAAATCCGACATAGATGCAGCC 862 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || | |||| | | || ||||| ||||| |||| |||||||| Sbjct 861 ATCGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACACACGCCTCACCTACCCTCTT 803 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||||| || || || || ||| ||||||| |||||||| | |||| || || || Sbjct 802 CAATGCAGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTAGCCATGAAAGACGA 743 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | || || |||| ||||| | | |||| || | ||||| || | ||||| Sbjct 742 CAGCATTGAAGGCATTTATGACACTCTGAAGCAGTGCGCCCTCATCTCCAAATCAGCTGG 683 Query 75451 GGGTATTGGGAT-GCA--CATCCATGATGTGAGAGCCA-ATAAATCTCGTATTCGGGGGA 75506 || || || | ||| || | || | | ||| | | | | || ||| || | Sbjct 682 AGGAATCGGCGTAGCAGTCAGC--TG-TATTAGATCGACAGGGAGCTAC-ATTGCCGGCA 627 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 ||||||| | ||| | ||| || | || ||||| | || | ||| ||| ||||| | Sbjct 626 CAAATGGCAACTCAAACGGTCTTGTCCCCATGCTGAGAGTGTACAACAACACGGCGCGTT 567 Query 75567 ATGTAAATCAAGCGGGGCGTCGCAAGG----GGTCCATCGCGGTCTACTTGGAACCATGG 75622 |||| | || | | || | |||| | || |||| | ||| | || || ||| Sbjct 566 ATGTCGACCAGG-GTGGAAACAAAAGGCCCGGAGCCTTCGCCATGTACCTTGAGCCCTGG 508 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 || ||| | | || ||| | ||| | | || ||| ||| | || ||| | Sbjct 507 CACTTTGATGTGTTTGACTTCTTGGAGCTGAAGAAG-AACACAGGAAAGGAGGAGCAGAG 449 Query 75682 GTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG- 75740 ||||| ||||| | || ||||||| || ||||| |||||||| | || ||| Sbjct 448 AGCCAGAGACCTCTTCTACGCCATGTGGATCCCCGACCTGTTCATGAAAAGAGTAGAGAG 389 Query 75741 -AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 | || | |||||||| | ||||| | || || || || || | | || Sbjct 388 CAACCAGGAC--TGGTCTCTGATGTGTCCTAATGAGTGCCCTGGGCTGGATGA-GTGCTG 332 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT 75859 || ||||||||||| || ||||| ||||| ||||||| || | || ||| | Sbjct 331 GGGGAGGAGTTTGAGAAGCTTTACACCTCATATGAGAAGGAGGGGAGGGTGAA-GCGTGT 273 Query 75860 -GTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918 || ||| | || ||| | || || || | || ||||| || || || || || Sbjct 272 GGTGAAAGCTCAGCAGGTGTGGCACGCAATCATCGAGTCCCAGACAGAAACAGGTACTCC 213 Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978 ||| |||||||| || || || || |||| |||| ||||| ||||| |||| || || Sbjct 212 ATACATGCTTTATAAAGACGCCTGCAACAGAAAGACCAACCATCAGAATCTGGGCACCAT 153 Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038 ||||||| || || ||||| ||||| | || ||||| | ||||| || || Sbjct 152 CAAGAGCAGCAACCTCTGCACAGAAATCGTTGAATACACCAGCCATGATGAAGTAGCCGT 93 Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGA 76098 ||| ||| |||| || || || || | |||||||| | ||| || |||||||| Sbjct 92 TTGTAATCTGGCTTCCATTGCACTCAACATGTATGTCACT-CTGAG---CGGACTTTTGA 37 Query 76099 TTATGAAAAACT 76110 | | | ||||| Sbjct 36 CTTTAAGAAACT 25 >seq1459 Length=39823 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 |||||||| ||||||||||| ||||| ||| || || | ||| |||||||||| || Sbjct 13105 GTGGAGGGGATCTTCTTCTCGGGGTCGTTCGCTGCGATCTTCTGGCTGAAGAAGCGCGGC 13046 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || ||||| ||||| |||||| || || || || | |||| |||||||| ||| Sbjct 13045 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCAGCAGAGACGAGGGTCTGCAC 12989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596469182422080