Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq349 136 3e-27 seq4673 116 3e-21 >seq349 Length=568042 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||| |||||| || | || || ||||| || || || ||||| || || | Sbjct 322043 CCTCCCCTCAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 321984 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || |||||||| ||| | |||| || ||||| || || || Sbjct 321983 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 321924 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | |||| |||||| | || | |||||| | || || Sbjct 321923 ATGCCCTCCTTGTCCTGGATTTTTGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACC 321864 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||||| || || || |||||||| | ||| || ||||| ||||||||||| Sbjct 321863 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATTTT 321814 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||| |||||| || | || || ||||||||||| || ||||| || || | Sbjct 322271 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAG 322212 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || |||||||| ||| | |||| || |||||||| || ||| Sbjct 322211 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 322152 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || |||||| | || | |||||| | || || Sbjct 322151 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACC 322092 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || || || ||||| | ||| || ||||| |||||||| Sbjct 322091 TCCAAGGTGATGGTCTTTCCAGTGAGGGTCTTCACAAAGATCTGCAT 322045 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||| |||||| || | || || ||||| || || || ||||| || || | Sbjct 322727 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 322668 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || || |||||| | |||| || |||||||| || ||| Sbjct 322667 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGA 322608 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || |||||| | || | ||||| | || || Sbjct 322607 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACC 322548 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||||||||| | ||| || ||||| |||||||| Sbjct 322547 TCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 322501 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||| |||||| || | || || ||||| || || || ||||| || || | Sbjct 322955 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 322896 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || || |||||| | |||| || |||||||| || ||| Sbjct 322895 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGGGGA 322836 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || |||||| |||| | ||||| | || || Sbjct 322835 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTTGGCTCCACC 322776 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||||||||| | ||| || || || |||||||| Sbjct 322775 TCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 322729 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||| |||||| || | || || ||||| || || || ||||| || || | Sbjct 323183 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 323124 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || || |||||| | |||| || |||||||| || ||| Sbjct 323123 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGA 323064 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || |||||| | || | ||||| | || || Sbjct 323063 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACC 323004 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||||||||| | ||| || ||||| |||||||| Sbjct 323003 TCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 322957 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||| |||||| || | || || ||||||||||| || ||||| || || | Sbjct 326973 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAG 326914 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || || |||||| | |||| || |||||||| || ||| Sbjct 326913 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGA 326854 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || ||||| | || | |||||| | || ||| Sbjct 326853 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCCACT 326794 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || ||||| | ||| || || || |||||||| Sbjct 326793 TCCAGGGTGATGGTCTTACCAGTGAGGGTCTTGACGAAGATCTGCAT 326747 Score = 118 bits (130), Expect = 8e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616 || |||||||||| |||||| || | ||| || ||||| || || || ||||| || || Sbjct 323414 TGCCCTCCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 323355 Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676 | | |||||| || || || || ||||||||| | |||| || |||||||| || Sbjct 323354 GAGAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGG 323295 Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736 ||||| || || ||||| || | || |||||| | || | ||||| | || Sbjct 323294 GGAATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTCTCAATGGTGTCGCTTGGCTCC 323235 Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||||||||| | ||| || || || |||||||| Sbjct 323234 ACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 323185 >seq4673 Length=16361 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||| ||| || |||| ||| || ||||||||||| || ||||| || || | Sbjct 2236 CCTCCCCTCAGACGAAGAACCAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAG 2295 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || ||||| || | |||| | |||||||| || || Sbjct 2296 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCGGGGGGG 2355 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||||||||| || || | || || || | || | ||||| | || || Sbjct 2356 ATACCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 2415 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || |||||||| | ||| |||||||| |||||||| Sbjct 2416 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 2462 Score = 111 bits (122), Expect = 1e-19 Identities = 162/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||||||||||| ||| |||| ||| || || ||||| || || || ||||| || || | Sbjct 2008 TCCTCCCCTCAGACGGAGCA-CAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2066 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | |||||| ||| || || || ||||||||| | |||| | |||||||| || || Sbjct 2067 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGG 2126 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||| || || | || ||||| | || | ||||| | || || Sbjct 2127 GATTCCTTCTTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCAC 2186 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || |||||||| | ||| |||||||| |||||||| Sbjct 2187 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 2234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385155979028706