Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq120 127 2e-24 >seq120 Length=1390912 Score = 127 bits (140), Expect = 2e-24 Identities = 244/356 (69%), Gaps = 13/356 (4%) Strand=Plus/Minus Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005 ||||| || | || || ||| |||||| |||||| ||||||||||| ||| ||| | | Sbjct 1290153 GCCAGCTCCTTGGGTGAGGTGAAGTCGTCCACGTGGATGAAAGCGTCACCCTGGATGAAG 1290094 Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065 || ||||| |||| || | | ||||| || | || || | || || |||| Sbjct 1290093 TTCTCGTAGTTCTGCCTTGGCGGGCCGAGAACCACTGGCACGGTGCCCACC----GAGAG 1290038 Query 177066 CGG----TAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATA 177121 ||| ||||||||||| ||||| |||||| |||| | ||||||||| || | || || Sbjct 1290037 CGGGTTGTAGAGTTTTTCAGTAATGTAGTCCTTGTGAATGGAGTTCTCGAAGGACAGGTA 1289978 Query 177122 GAATTTACAG--GAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACT 177179 ||| |||||| | || || |||| | |||| | || | || || ||||| | Sbjct 1289977 GAACTTACAGCTGGCCATGGT--GGGGAAGTAGTCTTGGTCAGCGATGTACTCTCCGAAG 1289920 Query 177180 ACGTTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGATCTC 177239 | | |||||| | || | || |||||||| ||||| ||||||| || | | Sbjct 1289919 GCTTGCCCGTACGCGTGAACCTCGATGTGTTTGTACAGCTCGTTGTAGTATTTCACGCGC 1289860 Query 177240 ACGTGGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGCGGG 177295 || || || | |||||| ||||| || | |||||| | | |||| | ||||| || Sbjct 1289859 ACATGTTCCTGGTTCCAGTTGCTCACAATCCAGCAGATCAGCTTG-TTTTTGCTGG 1289805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578334635433600