Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq4673 118 7e-22 seq349 113 3e-20 >seq4673 Length=16361 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | |||| ||| |||||| ||||| || |||||||| |||||| Sbjct 2236 CCTCCCCTCAGACGAAGAACCAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAG 2295 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || ||||| || |||| |||||||||||| | || Sbjct 2296 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCGGGGGGG 2355 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| ||||| || || || ||| || | || | ||||||||| | ||||| Sbjct 2356 ATACCCTCTTTATCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGCTGGGCTCCAC 2414 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || | || || ||||||||||||||| Sbjct 2415 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTAACAAAGATCTGCATA 2463 Score = 104 bits (114), Expect = 2e-17 Identities = 162/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | ||| || || || ||| ||| || || |||||||| |||||| Sbjct 2009 CCTCCCCTCAGACGGAGCAC-AAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2067 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| |||| |||||||||||| | || Sbjct 2068 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGGG 2127 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||| || || || | | || | || | ||||||||| | ||||| Sbjct 2128 ATTCCTTCTTTATCCTGGATCTT-GGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCAC 2186 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || |||||||||||||| Sbjct 2187 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 2234 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || |||| ||| | ||| | || || ||| ||| || || |||||||| ||||| Sbjct 2463 ACCTCCCCTCAGACGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2522 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || |||| || || || ||||| |||| |||||||||||| | || Sbjct 2523 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGG 2582 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| || || || || | | |||| || | ||||| |||| |||| Sbjct 2583 GATCCCTTCCTTATCCTGGATCTT-GGCCTTGACATTTTCAATTGTGTCACTTGGCTCCA 2641 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || |||| || || |||||||||||||| Sbjct 2642 CCTCCAAAGTGATGGTCTTCCCGGTTAGGGTCTTCACAAAGATCTGCAT 2690 >seq349 Length=568042 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || |||| ||| | || | || || ||| ||| || || |||||||| ||||| Sbjct 327202 ACCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 327143 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| |||| || || || ||||| |||| | |||||||||| | || Sbjct 327142 GAGGGTGCGGCCGTCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 327083 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | || || ||||| || || || | ||| ||| ||||||||||| |||| Sbjct 327082 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCGCTTGGCTCCA 327024 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| ||||| ||||| | || || |||||||||||||| Sbjct 327023 CCTCTAGGGTGATTGTTTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 326975 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | || | || || ||| ||| || || |||||||| |||||| Sbjct 322043 CCTCCCCTCAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 321984 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||||| |||||||| |||| | |||||| ||| | || Sbjct 321983 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 321924 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || || ||||| ||||| || | |||| ||| |||||| |||| ||||| Sbjct 321923 ATGCCCTCCTTGTCCTGGATTTT-TGCCTTGACATTCTCAATGGTGTCACTTGGCTCCAC 321865 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | || || |||||||||||||| Sbjct 321864 CTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 321817 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | || | ||| || ||| ||| || || |||||||| |||||| Sbjct 323411 CCTCCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 323352 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || || ||||| |||| | |||||||||| | || Sbjct 323351 AGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGA 323292 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | ||| ||| ||||||||||| ||||| Sbjct 323291 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGA-CATTCTCAATGGTGTCGCTTGGCTCCAC 323233 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || | || || || ||||||||||| Sbjct 323232 CTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 323185 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | || | || || ||| ||||| || |||||||| |||||| Sbjct 322271 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAG 322212 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||||| |||||||| |||| | |||||||||| | || Sbjct 322211 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 322152 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | ||| ||| |||||| |||| ||||| Sbjct 322151 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCACTTGGCTCCAC 322093 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || |||||||||||||| Sbjct 322092 CTCCAAGGTGATGGTCTTTCCAGTGAGGGTCTTCACAAAGATCTGCAT 322045 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | || | || || ||| ||| || || |||||||| |||||| Sbjct 322499 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 322440 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || || ||||| |||| | |||||||||| | || Sbjct 322439 AGGGTGCGGCCGTCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGA 322380 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || || ||||| || || || | ||| ||| ||||||||||| ||||| Sbjct 322379 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCGCTTGGCTCCAC 322321 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || ||||| || | || || || ||||||||||| Sbjct 322320 CTCTAGGGTGATGGTCTTACCGGTAAGGGTCTTGACGAAGATCTGCAT 322273 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | || | || || ||| ||| || || |||||||| |||||| Sbjct 322727 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 322668 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| |||| | |||||||||| | || Sbjct 322667 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGA 322608 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || || ||||| || || || | ||| ||| ||||||||||| ||||| Sbjct 322607 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCGCTTGGCTCCAC 322549 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || | || || |||||||||||||| Sbjct 322548 CTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 322501 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | || | || || ||| ||| || || |||||||| |||||| Sbjct 322955 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 322896 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || |||||||||| | |||||||||| | || Sbjct 322895 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGGGGA 322836 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || || ||||| || || || | ||| ||| ||||||||||| ||||| Sbjct 322835 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CATTTTCAATGGTGTCGCTTGGCTCCAC 322777 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || | || || || ||||||||||| Sbjct 322776 CTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 322729 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | || | || || ||| ||| || || |||||||| |||||| Sbjct 323183 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 323124 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| |||| | |||||||||| | || Sbjct 323123 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGA 323064 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || || ||||| || || || | ||| ||| ||||||||||| ||||| Sbjct 323063 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCGCTTGGCTCCAC 323005 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || | || || |||||||||||||| Sbjct 323004 CTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 322957 Score = 100 bits (110), Expect = 2e-16 Identities = 164/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | || | || || ||| ||| || || |||||||| |||||| Sbjct 326745 CCTCCCCTCAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 326686 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || |||||||| |||| | |||||| ||| | || Sbjct 326685 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 326626 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || || ||||| || || || | ||| ||| ||||||||||| ||||| Sbjct 326625 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CATTTTCAATGGTGTCGCTTGGCTCCAC 326567 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGG 33755 || | ||||| || || || || | || || |||||||||||||| |||| Sbjct 326566 CTCTAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGTTTGG 326513 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | || | || || ||| ||||| || |||||||| |||||| Sbjct 326973 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAG 326914 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| |||| | |||||||||| | || Sbjct 326913 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGA 326854 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || || ||||| || || || | | | ||| |||||| |||| ||||| Sbjct 326853 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTCTCAATGGTGTCACTTGGCTCCAC 326795 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || ||||| || | || || || ||||||||||| Sbjct 326794 TTCCAGGGTGATGGTCTTACCAGTGAGGGTCTTGACGAAGATCTGCAT 326747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328650054126720