Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4673 93.3 4e-14 seq349 87.8 2e-12 seq86 87.8 2e-12 >seq4673 Length=16361 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 131917 CAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAG 131976 ||| || | | | ||||| || || |||||||||||| | ||| || |||||| || Sbjct 2028 CAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAG 2087 Query 131977 CTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAAT 132036 ||| || || | | |||| |||||||| ||||| || || || ||||||||||| || Sbjct 2088 CTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGGGATTCCTTCTTTATCCTGGAT 2147 Query 132037 TTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACC 132096 || || | | || | || ||| | |||||||| || | || | || || || Sbjct 2148 CTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCC 2207 Query 132097 AGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 |||||| || || | || ||||||||| || Sbjct 2208 AGTCAGGGTCTTAACAAAGATCTGCATGCCT 2238 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||| ||| | | || ||||| || |||||||||||| | ||| || |||||| Sbjct 2253 AACCAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTC 2312 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || |||| |||| |||||||| ||||| || || || || |||||||| Sbjct 2313 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCGGGGGGGATACCCTCTTTATCCTG 2372 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || || |||| | || | || ||| | |||||||| || | || | || || Sbjct 2373 GATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTT 2432 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || | || |||||||| Sbjct 2433 GCCAGTCAGGGTCTTAACAAAGATCTGCAT 2462 >seq349 Length=568042 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||| || |||||| ||||| ||||| | | Sbjct 322922 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCA 322863 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || | ||| |||||||| || ||||| || || || || || || | Sbjct 322862 AAAATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 322803 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || ||| | |||||||| || | || | ||||| ||||| || || || Sbjct 322802 TTTTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTG 322743 Query 132110 ATGAAAATCTGCATGACT 132127 | ||| ||||||||| || Sbjct 322742 ACGAAGATCTGCATGCCT 322725 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || |||||||||||| | ||| || |||||| ||||| ||||| | | Sbjct 326940 GATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCA 326881 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| |||||||| || ||||| || || || || || || | Sbjct 326880 AAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 326821 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||||||||||| | || | || |||||||| || || || Sbjct 326820 TTCTCAATGGTGTCACTTGGCTCCACTTCCAGGGTGATGGTCTTACCAGTGAGGGTCTTG 326761 Query 132110 ATGAAAATCTGCATGACT 132127 | ||| ||||||||| || Sbjct 326760 ACGAAGATCTGCATGCCT 326743 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| || | ||| | | | ||||| || || |||||||||||| | ||| || Sbjct 323399 CGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCG 323340 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| || || | | |||| || | ||| |||||||| || |||||||| || Sbjct 323339 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTG 323280 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || || | | || | || ||| | |||||||| || | || | Sbjct 323279 TCCTGGATCTTAGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATT 323220 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 ||||| ||||| || || || | ||| ||||||||| || Sbjct 323219 GTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGCCT 323181 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||| | || | | | ||||| || || |||||||||||| | ||| || | Sbjct 322031 CGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA 321972 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| |||||||| |||| | |||| || | ||| || ||||| || ||||| || || Sbjct 321971 TCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTG 321912 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| || | | || | || || | |||||||| || | || | Sbjct 321911 TCCTGGATTTTTGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACCTCAAGGGTGATG 321852 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| || || || | || |||||||| Sbjct 321851 GTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 321817 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || |||||||||||| | ||| || |||||| |||||||| |||| | Sbjct 322238 GATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCA 322179 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| |||||||| || |||||||| || || || || || | Sbjct 322178 AAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACA 322119 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | |||||||| || | || | || || ||||| || || || Sbjct 322118 TTCTCAATGGTGTCACTTGGCTCCACCTCCAAGGTGATGGTCTTTCCAGTGAGGGTCTTC 322059 Query 132110 ATGAAAATCTGCATGACT 132127 | || ||||||||| || Sbjct 322058 ACAAAGATCTGCATGCCT 322041 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||| || |||||| ||||| ||||| | | Sbjct 322694 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCA 322635 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| |||||||| || ||||| || || || || || || | Sbjct 322634 AAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 322575 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | |||||||| || | || | ||||| ||||| || || || Sbjct 322574 TTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTC 322515 Query 132110 ATGAAAATCTGCATGACT 132127 | || ||||||||| || Sbjct 322514 ACAAAGATCTGCATGCCT 322497 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||| || |||||| ||||| ||||| | | Sbjct 323150 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCA 323091 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| |||||||| || ||||| || || || || || || | Sbjct 323090 AAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 323031 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | |||||||| || | || | ||||| ||||| || || || Sbjct 323030 TTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTC 322971 Query 132110 ATGAAAATCTGCATGACT 132127 | || ||||||||| || Sbjct 322970 ACAAAGATCTGCATGCCT 322953 >seq86 Length=1688118 Score = 87.8 bits (96), Expect = 2e-12 Identities = 462/721 (64%), Gaps = 25/721 (3%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| | |||||||| || | ||| || | | | || | ||||| ||| | | | Sbjct 230587 TTGACGATCTGAAACTCTCCAGACAGGACTCTGCGGGTGTAGATGTTGCTGGTGTAGGCC 230528 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || | ||||| || ||||| | || || || |||| ||||| ||||| || | | Sbjct 230527 TCGATGGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAGGCGGTGGGCATCGGGGCGAGC 230468 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA-AGTTTGCCAGTCCCA 147071 | || || | || || | ||| || ||||||| || || ||||||| | Sbjct 230467 AGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTT-CCAGTCCAA 230409 Query 147072 CA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCA-CTCCTCGACTGGCGGG 147128 || ||| | |||| || | ||||||||||||||| || | | ||| | ||| | || Sbjct 230408 CAGGTCG--GTGGGCTTCTTCTCCCACATGTCGTACTGCAGAATCCCCTTG-CTGACCGG 230352 Query 147129 ACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGC-GCCAATTCACAGCTTGCCTCGA 147187 | || || | || ||| ||| || | || |||| || ||||||||||| | Sbjct 230351 AGACCCTTCGTAAGTCTCGTACGGGCCGA-GCTCGGCAGCCAGCTCGCAGCTTGCCTCAA 230293 Query 147188 GCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCT 147247 | || | ||||| || || || ||| || |||| || | || ||| ||| | Sbjct 230292 GGGCGGCGTAGTAGATCGTCTCAAAGATGTGAATGTTCAGCAACTGGGCCTCTGGGCTTT 230233 Query 147248 CGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAG 147307 | | || |||| || | ||||| || ||||||||||| | |||| || || | Sbjct 230232 CAAACGGGTACCGCATGAGGATGAAGGCGTCAGCCAAACCCTGAACGCCGATACCAATCG 230173 Query 147308 GTC---GATGCTTTTCGTTG-CTGCGCTTCGCGCT-CGCTATGGGATAGTGGTTGCGATC 147362 | | || |||| | ||| || | ||| || || || |||||| |||| || Sbjct 230172 GCCTGTGACGCTTGT--TTGACTTC---TCGGCCTCCGGTACAGGATAGAAGTTGATCTC 230118 Query 147363 AATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATC 147422 || |||||||| | ||| || | |||||| || | ||||||| || || Sbjct 230117 GATGATCTTGTTCAAGTTCTTGACGATAACTTTGGTGACGTCAGCTAGTTTCTTAAAGTC 230058 Query 147423 ATAAGTCCCGTCTTCGACACGT-ACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGA 147481 | |||||| || | | || || | ||| | || || || |||||||| || | Sbjct 230057 AAAAGTCCGCTC----AGAGGTGACATACATGTTGAGTGCAATGGAAGCCAGATTACAAA 230002 Query 147482 CGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTA 147541 |||| || || | | |||| | |||||||| | ||| |||||||||| || | Sbjct 230001 CGGCTACTTCATCATGGCTGGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTCTTGA 229942 Query 147542 TGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACG 147601 || |||| ||| || || ||| | || | ||||| |||||||| | |||||||| | Sbjct 229941 TGGTGCCCAGATTCTGATGGTTGGTCTTTCTGTTGCAGGCGTCTTTATAAAGCATGTATG 229882 Query 147602 G 147602 | Sbjct 229881 G 229881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476530974419760