Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq671 111 1e-19 seq924 87.8 1e-12 >seq671 Length=193139 Score = 111 bits (122), Expect = 1e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 77311 CCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTTGAC 77370 |||||| ||||||||||| ||| ||| |||||||||||| ||| ||||| |||||| Sbjct 61308 CCAGACGACCTCCAGCTCTGCATTCAGTCGGTCCAGCTTCACAAAATCATCTTTGTTGGT 61249 Query 77371 AACTGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTTAACCCACTTAGT 77430 | | ||||| | |||||||||||||||| ||||||||||||| ||||| | || Sbjct 61248 GATCGGACCTCCAGACTTCAGCCTCCAGCCGTTCAGCTTCCAGTTCTTCACCCAGCTGGT 61189 Query 77431 CACACC 77436 |||||| Sbjct 61188 CACACC 61183 Score = 100 bits (110), Expect = 2e-16 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 77862 CTTCTCTGACAAACGCCCAGGCATCTTGCTCTGTTGCAAACTTCTTAAATACGGCTGCTG 77921 || ||||||| |||| ||||||||||| ||||| |||||||||||| || ||||| | Sbjct 58383 CTCCTCTGACGAACGACCAGGCATCTTTCTCTGATGCAAACTTCTTGAAAGAAGCTGCAG 58324 Query 77922 GGAATTTGTCTACTTGGCTCTTACATTCATCCC 77954 | || ||||| || ||||||||||||||||||| Sbjct 58323 GAAACTTGTCCACCTGGCTCTTACATTCATCCC 58291 Score = 86.0 bits (94), Expect = 5e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 77433 CACCATTGATGGTGAACATGCTGTCTGTGTAGACGACCAGCTTCTTGATTTTGTTCTCCT 77492 |||| |||||||||||| ||||||||||||||| || || ||||| || || |||| | Sbjct 61038 CACCGTTGATGGTGAACTTGCTGTCTGTGTAGAGAACTAGTTTCTTAATGTTCATCTCTT 60979 Query 77493 GAGCTTGTTGCAGTGCTTTGGATGCAGCCTGG 77524 |||||||| || |||||| | || |||||| Sbjct 60978 TGGCTTGTTGGAGCGCTTTGCAGGCTGCCTGG 60947 >seq924 Length=99976 Score = 87.8 bits (96), Expect = 1e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 87328 CCTGCTCCCAGTTTACTAAAATCTTTCTTAGATTGAAATGTATAGACTGTCAAGCCAGCA 87387 |||||||||| ||||| || ||| |||| || ||||| || | |||| | |||||| Sbjct 7326 CCTGCTCCCATCTTACTGAAGTCTCTCTTGGACTGAAAGGTGAACGCTGTGAGTCCAGCA 7385 Query 87388 AACACAGCACATGTTaaaaaaaGCGATTGTAGTATGGTGGAGTATTCATAGAAGGTCA 87445 ||||| ||||| || | || |||| || || | |||||||| ||||||||||||| Sbjct 7386 AACACTGCACAGGTGAGGAACAGCGCCTGCAGCACCGTGGAGTACTCATAGAAGGTCA 7443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397390770763330