Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq86 214 2e-50 seq5694 138 1e-27 seq80 109 7e-19 >seq86 Length=1688118 Score = 214 bits (236), Expect = 2e-50 Identities = 959/1491 (64%), Gaps = 34/1491 (2%) Strand=Plus/Minus Query 110610 GATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGT 110669 ||| |||||| |||| | ||| || || ||| | | ||||| |||| || || || Sbjct 230646 GATTCTTCATCTCCTCGCTCCACAGCCCCTTCTCCGTCAGGTCTTTGAGCAGATGAGGGT 230587 Query 110670 TGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTT 110729 |||| || |||||| || | ||| ||| | ||||||||| | ||||| | | Sbjct 230586 TGACGATCTGAAACTCTCCAGACAGGACTCTGCGGGTGTAGATGTTGCTGGTGTAGGCCT 230527 Query 110730 CAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCA 110789 | | | | || || || |||| ||| |||||||||||||| || ||||| || || | || Sbjct 230526 CGATGGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAGGCGGTGGGCATCGGGGCGAGCA 230467 Query 110790 AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGT 110849 || ||||| | | || | | ||| ||||| || | | |||||| | Sbjct 230466 GCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCAACA 230407 Query 110850 TGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCA-CCCCTTG-GGACGCGGGAG 110906 | | | || ||| || |||||||||| |||| || | ||||||| || | |||| Sbjct 230406 GGTCGGTGGGCTTCTTCT-CCCACATGTCGTACTGCAGAATCCCCTTGCTGA--CCGGAG 230350 Query 110907 AACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGG 110966 | || || | || || || | || | | |||||| || ||||| ||||| |||| Sbjct 230349 ACCCTTCGTAAGTCTCGTACGGGCCGAGCTCGGCAGCCAGCTCGCAGCTTGCCTCAAGGG 230290 Query 110967 ATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAA 111026 |||| || || || |||||||| || |||| | || ||| || |||| Sbjct 230289 CGGCGTAGTAGATCGTCTCAAAGATGTGAATGTTCAGCAACTGGGCCTCTGGGCTTTCAA 230230 Query 111027 ATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTC 111086 | | ||| || | || || | || || | ||| ||||| || | |||||| || | Sbjct 230229 ACGGGTACCGCATGAGGATGAAGGCGTCAGCCAAACCCTGAACGCCGATACCAATCGGCC 230170 Query 111087 TGTGTCGCATATTAGACTT-TCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACT 111145 |||| ||| | || ||||| ||| || | || ||||| || || | || |||| Sbjct 230169 TGTGACGCTTGTTTGACTTCTCG-GCCTCCGGTACAGGATAGAAGTTGATCTCGATGATC 230111 Query 111146 CGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTG 111205 ||| | || ||| | || || |||| ||| ||||| | | | |||||||| Sbjct 230110 TTGTTCAAGTTCTTGACGATAACTTTGGTGACGTCAGCTAGTTTCTTAAAGTCAAAAGTC 230051 Query 111206 CGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTC 111265 || ||| |||||||| | || || || || |||| ||| ||||| || Sbjct 230050 CG---CTCAGAGGTGACATACATGTTGAGTGCAATGGAAGCCAGATTACAAACGGCTACT 229994 Query 111266 TCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCC 111325 ||||| | ||||| || | |||||||| || | |||| ||||| || || ||| Sbjct 229993 TCATCATGGCTGGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTCTTGATGGTGCCC 229934 Query 111326 AAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCC 111385 | ||||| ||||| |||| ||||||| || || || || |||||||| || || || Sbjct 229933 AGATTCTGATGGTTGGTCTTTCTGTTGCAGGCGTCTTTATAAAGCATGTATGGAGTACCT 229874 Query 111386 GTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTG 111445 || || ||||| || | || || || | ||| || | ||| || | || Sbjct 229873 GTTTCTGTCTGGGACTCGATGATTGCGTGCCACACCTGCTGAGCTTTCACCACACGCTTC 229814 Query 111446 GCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTC 111504 ||| |||||| ||| || ||||| || ||||||||||| ||| | || || Sbjct 229813 ACCCTCCCCTCCTTCTCATATGAGGTGTAAAGCTTCTCAAACTCCTC-CCCCCAGCACTC 229755 Query 111505 GGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTT--CCTCAACC 111562 || || || || | ||||| | |||||||| | || || ||| || Sbjct 229754 ATCCAGCCCAGGGCACTCATTAGGACACATCAGAGACCA--GTCCTGGTTGCTCTCTACT 229697 Query 111563 CGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCT 111622 | |||||||| ||||| || ||||||| || | ||||| ||||| | ||| Sbjct 229696 CTTTTCATGAACAGGTCGGGGATCCACATGGCGTAGAAGAGGTCTCTGGCTCTCTGCTCC 229637 Query 111623 TCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTC 111681 || | ||| ||| || | | ||| | ||| || | | ||| |||||| ||||| Sbjct 229636 TCCTTTCCTGTGTT-CTTCTTCAGCTCCAAGAAGTCAAACACATCAAAGTGCCAGGGCTC 229578 Query 111682 AAGATAGACTGCGATAGATC----CCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTG 111737 ||| || | |||| | || ||||| | ||| | || | ||||| ||||| | Sbjct 229577 AAGGTACATGGCGAAGGCTCCGGGCCTTTTG-TTTCCACCCTGGTCGACATAACGCGCCG 229519 Query 111738 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA 111797 || ||| | || | ||||| || | || ||| | ||| | |||||||| || || Sbjct 229518 TGTTGTTGTACACTCTCAGCATGGGGACAAGACCGTTTGAGTTGCCATTTGTGCCGGCAA 229459 Query 111798 TACGAGATTTAT-TGGCTCTCACATCATGGATG--TGC-ATCCCAATACCCCCAGCCCAC 111853 | || | | | | ||| | | || | || ||| | || || || ||||| | Sbjct 229458 T-GTAGCTCCCTGTCGATCTAATA-CA--GCTGACTGCTACGCCGATTCCTCCAGCTGAT 229403 Query 111854 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 111913 || ||||| | || |||| | | ||||| |||| || || | || ||| || || Sbjct 229402 TTGGAGATGAGGGCGCACTGCTTCAGAGTGTCATAAATGCCTTCAATGCTGTCGTCTTTC 229343 Query 111914 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 111973 |||| | |||||||| ||||||| ||| || || || || |||||||||||||| Sbjct 229342 ATGGCTAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCTGCATTGAAGAGGGTA 229283 Query 111974 GGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATC 112032 |||| ||||| ||||| || | | |||| | || ||| ||||| | | | | ||| Sbjct 229282 GGTGAGGCGTGTGTGAAC-CACTTCTCAGACAGCAGGTTGTAGGTCTCGATGGCTGCATC 229224 Query 112033 AATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 ||||| |||||| |||| | || | ||| | ||||| |||||| Sbjct 229223 TATGTCGGATTTGTGGATTCCGACAGAAACTCTCATCAGCATGTGCTGTGG 229173 >seq5694 Length=14491 Score = 138 bits (152), Expect = 1e-27 Identities = 589/911 (65%), Gaps = 26/911 (3%) Strand=Plus/Plus Query 111185 AGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGAT 111244 ||||| | | | |||||||| || ||| | |||||||| | || || || || Sbjct 25 AGTTTCTTAAAGTCAAAAGTCCG---CTCAG-AGTGACATACATGTTGAGTGCAATGGAA 80 Query 111245 GCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAG 111304 |||| ||| ||||| || ||||| | ||||| || | |||||||| || | | Sbjct 81 GCCAGATTACAAACGGCTACTTCATCATGGCTGGTGTATTCAACGATTTCTGTGCAGAGG 140 Query 111305 TTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTG 111364 ||| ||||| || || |||| ||||| ||||| |||| ||||||| || || || Sbjct 141 TTGCTGCTCTTGATGGTGCCCAGATTCTGATGGTTGGTCTTTCTGTTGCAGGCGTCTTTA 200 Query 111365 TAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCG 111424 || |||||||| || || || || || ||||| || | || || || | ||| || | Sbjct 201 TAAAGCATGTATGGAGTACCTGTTTCTGTCTGGGACTCGATGATTGCGTGCCACACCTGC 260 Query 111425 GCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 111484 ||| || | || ||| |||||| ||| || ||||| || ||| Sbjct 261 TGAGCTTTCACCACACGCTTCACCCTCCCCTCCTTCTCATATGAGGTGTAAAGCTTCTCA 320 Query 111485 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCAT 111544 |||||||| |||| | | || || || || || | ||||| | |||||||| Sbjct 321 AACTCCTCCCCCAGCAC-TCATCCAGCCCAGGGCACTCATTAGGACACATCAGAGACCAG 379 Query 111545 TGACCACCTTCCTCA--ACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 111602 | || || ||| || | |||||||| ||||| || ||||||| || | |||| Sbjct 380 T--CCTGGTTGCTCTCTACTCTTTTCATGAACAGGTCGGGGATCCACATGGCGTAGAAGA 437 Query 111603 GATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAACTCCATG 111661 | ||||| | ||| || | ||| ||| || | | ||| | ||| || | Sbjct 438 GGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGTTCT-TCTTCAGCTCCAAGAAGTCAAAC 496 Query 111662 ATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGC 111717 | ||| |||||| |||||||| || | |||| | ||| |||| | || | | Sbjct 497 ACATCAAAGTGCCAGGGCTCAAGGTACATGGCGAAGGCTCCGGGCCTTTTGTTTCC-ACC 555 Query 111718 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 111777 || | ||||| ||||| ||| ||| | || | ||||| || | || ||| | ||| Sbjct 556 CTGGTCGACATAACGCGCCGTGTTGTTGTACACTCTCAGCATGGGGACAAGACCGTTTGA 615 Query 111778 TTGACCATTTGTCCCCCGAATACGAGATTTAT-TGGCTCTCACATCATGGATG--TGCAT 111834 | |||||||| || ||| || | | | | ||| | | || | || ||| Sbjct 616 GTTGCCATTTGTGCCGGCAATGT-AGCTCCCTGTCGATCTAATA-CA--GCTGACTGCTA 671 Query 111835 C-CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATAC 111893 | || || || ||||| | || ||||| | || |||| | | ||||| |||| || | Sbjct 672 CGCCGATTCCTCCAGCTGATTTGGAGATGAGGGCGCACTGCTTCAGAGTGTCATAAATGC 731 Query 111894 CGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTG 111953 | | || ||| || || |||| | |||||||| ||||||| ||| || || | Sbjct 732 CTTCAATGCTGTCGTCTTTCATGGCTAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGG 791 Query 111954 TACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCG 112012 | || |||||||||||||| |||| ||||| ||||| || | | |||| | || | Sbjct 792 TTCCTGCATTGAAGAGGGTAGGTGAGGCGTGTGTGAAC-CACTTCTCAGACAGCAGGTTG 850 Query 112013 TATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAAC 112072 || ||||| | | | | ||| ||||| |||||| |||| | || | ||| | | Sbjct 851 TAGGTCTCGATGGCTGCATCTATGTCGGATTTGTGGATTCCGACAGAAACTCTCATCAGC 910 Query 112073 ATGTACTGTGG 112083 |||| |||||| Sbjct 911 ATGTGCTGTGG 921 >seq80 Length=1733396 Score = 109 bits (120), Expect = 7e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||| ||| ||||||||| | ||| ||||| || | |||| | ||| || || || Sbjct 121963 CTCATCTTTACTTGTGTACTCGACAATCTCTGTGCACAGGTTGCTAGACTTGATGGTGCC 122022 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 || ||||| ||||| |||||| ||||||| || ||||||||||||||||| || || || Sbjct 122023 CAGATTCTGCTGGTTGCTCTTCCTGTTGCATGCGTCCTTGTAGAGCATGTATGGTGTACC 122082 Query 111385 CGTCTCCGTCTGTGA 111399 || || ||||| || Sbjct 122083 AGTTTCTGTCTGAGA 122097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627926286513600