Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq86 183 4e-41 seq5694 122 1e-22 seq1459 111 2e-19 seq80 95.1 1e-14 >seq86 Length=1688118 Score = 183 bits (202), Expect = 4e-41 Identities = 856/1337 (64%), Gaps = 48/1337 (4%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| || || |||||| Sbjct 230548 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAG 230489 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || |||||||| || || | || |||||||| | | || | || || ||| Sbjct 230488 GCGGTGGGCATCGGGGCGAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCC 230429 Query 118302 TTGAG-AGCGTCCCAGTC------GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAA 118354 || || ||| ||| |||| || | || |||| |||||| |||| || | Sbjct 230428 TTCAGCAGCTTCC-AGTCCAACAGGTCGGTGGGCTTCTTCTCCC------ACATGTCGTA 230376 Query 118355 CTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTC 118414 ||| || || || | | | || || || || | ||||| || ||||| | | Sbjct 230375 CTGCAGAATCCCCTTGCTGACCGGAGACCCTTCGTAAGTCTCGTACGGGCCGAGCTCGGC 230316 Query 118415 CGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATT 118474 |||| ||| |||| ||||| ||||| |||| || || || ||||| ||| || || Sbjct 230315 AGCCAGCTCGCAGCTTGCCTCAAGGGCGGCGTAGTAGATCGTCTCAAAGATGTGAATGTT 230256 Query 118475 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAG 118534 || || |||||| | ||||||| | || | || || | || || | Sbjct 230255 CAGCAACTGGGCCTCTGGGCTTTCAAACGGGTACCGCATGAGGATGAAGGCGTCAGCCAA 230196 Query 118535 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-- 118592 ||| || || |||| ||||| || | || | | | || |||||| ||| |||| Sbjct 230195 ACCCTGAACGCCGATACCAATCGGCCTGTGACGCTTGTTTGACTTCT---CGGCCTCCGG 230139 Query 118593 -ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 118651 || ||||| || || | ||||| | | | || | || ||| || ||| || |||| Sbjct 230138 TACAGGATAGAAGTTGATCTCGATGATCTTGTTCAAGTTCTTGACGATAACTTTGGTGAC 230079 Query 118652 TTCATGAAGCTTTTCGTAA--TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG 118709 ||| || |||| ||| |||||| | || ||| |||||||| | || Sbjct 230078 GTCAGCTAG--TTTCTTAAAGTCAAAAGTCCG---CTCAGAGGTGACATACATGTTGAGT 230024 Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769 || || || ||||||||||| || | ||||| | ||||| || | ||||| Sbjct 230023 GCAATGGAAGCCAGATTACAAACGGCTACTTCATCATGGCTGGTGTATTCAACGATTTCT 229964 Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829 ||||| | ||| ||||| |||||||||| |||| || || | |||| |||| || Sbjct 229963 GTGCAGAGGTTGCTGCTCTTGATGGTGCCCAGATTCTGATGGTTGGTCTTTCTGTTGCAG 229904 Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 || || || |||||||||||||| || || || || || ||||||| || || || | | Sbjct 229903 GCGTCTTTATAAAGCATGTATGGAGTACCTGTTTCTGTCTGGGACTCGATGATTGCGTGC 229844 Query 118890 CAGACATCGGCAGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948 || || | |||| || || || || | | |||||| | ||| || ||||| Sbjct 229843 CACACCTGCTGAGCTTTCACCACACGC-TTCACCCTCCCCTCCTTCTCATATGAGGTGTA 229785 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008 || |||||||| || ||| | ||| ||||| || || || || || | Sbjct 229784 AAGCTTCTCAAACTCCTCCCCCCAGCACTCATCCAGCCCAGGGCACTCATTAGGACACAT 229725 Query 119009 GAGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 119066 |||||||| | || | ||| || | |||||||| ||||| |||||||| | Sbjct 229724 CAGAGACCA--GTCCTGGTTGCTCTCTACTCTTTTCATGAACAGGTCGGGGATCCACATG 229667 Query 119067 GCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 119125 || ||||||| || | | | ||| || | | || || || || |||||| Sbjct 229666 GCGTAGAAGAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAA 229608 Query 119126 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACC----CCTTAC 119181 ||||| | | ||| |||||| || || ||||||| |||| | | |||| Sbjct 229607 GAAGTCAAACACATCAAAGTGCCAGGGCTCAAGGTACATGGCGAAGGCTCCGGGCCTTTT 229548 Query 119182 GACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241 | ||| |||||| ||||| | ||| ||| ||| | || | ||||| || | | Sbjct 229547 G-TTTCCACCCTGGTCGACATAACGCGCCGTGTTGTTGTACACTCTCAGCATGGGGACAA 229489 Query 119242 TACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG--GCTCTGACATCGTG 119299 ||| | || | ||||||||| || ||| | || || | ||| | | | Sbjct 229488 GACCGTTTGAGTTGCCATTTGTGCCGGCAAT--GTAGCTCCCTGTCGATCTAATACAGCT 229431 Query 119300 GATGTGC-ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGC 119358 || ||| | || || || || || | || ||||| | ||||||| | | ||| || Sbjct 229430 GA-CTGCTACGCCGATTCCTCCAGCTGATTTGGAGATGAGGGCGCACTGCTTCAGAGTGT 229372 Query 119359 CGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAG 119418 | || || || || || ||| | || | || | ||||||||||| |||| || | Sbjct 229371 CATAAATGCCTTCAATGCTGTCGTCTTTCATGGCTAGCAGGAAGCAGCTGGACAGCTGTG 229312 Query 119419 GCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGAC 119477 ||||| || || || |||||||| || |||| ||||| ||||| || | | ||| Sbjct 229311 GCCTGTTGGTTCCTGCATTGAAGAGGGTAGGTGAGGCGTGTGTGAAC-CACTTCTCAGAC 229253 Query 119478 ATCTTGTCGTAGGTCTC 119494 | | || ||||||||| Sbjct 229252 AGCAGGTTGTAGGTCTC 229236 >seq5694 Length=14491 Score = 122 bits (134), Expect = 1e-22 Identities = 526/814 (65%), Gaps = 22/814 (3%) Strand=Plus/Plus Query 118693 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 118752 |||||||| | || || || || ||||||||||| || | ||||| | | Sbjct 55 TGACATACATGTTGAGTGCAATGGAAGCCAGATTACAAACGGCTACTTCATCATGGCTGG 114 Query 118753 TGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 118812 |||| || | ||||| ||||| | ||| ||||| |||||||||| |||| || | Sbjct 115 TGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTCTTGATGGTGCCCAGATTCTGATGGT 174 Query 118813 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 118872 | | |||| |||| || || || || |||||||||||||| || || || || || |||| Sbjct 175 TGGTCTTTCTGTTGCAGGCGTCTTTATAAAGCATGTATGGAGTACCTGTTTCTGTCTGGG 234 Query 118873 ACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCT 118931 ||| || || || | ||| || | |||| || || || || | | |||||| Sbjct 235 ACTCGATGATTGCGTGCCACACCTGCTGAGCTTTCACCACACGC-TTCACCCTCCCCTCC 293 Query 118932 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 118991 | ||| || ||||| || |||||||| || |||| | ||| ||||| || Sbjct 294 TTCTCATATGAGGTGTAAAGCTTCTCAAACTCCTCCCCCA-GCACTCATCCAGCCCAGGG 352 Query 118992 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGA 119049 || || || || | |||||||| | || | ||| || | |||||||| | Sbjct 353 CACTCATTAGGACACATCAGAGACCA--GTCCTGGTTGCTCTCTACTCTTTTCATGAACA 410 Query 119050 GGTCTGGGATCCAGAGCGCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGA 119108 |||| |||||||| | || ||||||| || | | | ||| || | | || || Sbjct 411 GGTCGGGGATCCACATGGCGTAGAAGAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG- 469 Query 119109 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 119168 || || |||||| ||||| | | ||| |||||| || || ||||||| ||| Sbjct 470 TTCTTCTTCAGCTCCAAGAAGTCAAACACATCAAAGTGCCAGGGCTCAAGGTACATGGCG 529 Query 119169 ATTGACC----CCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC 119224 | | | |||| | ||| |||||| ||||| | ||| ||| ||| | || Sbjct 530 AAGGCTCCGGGCCTTTTG-TTTCCACCCTGGTCGACATAACGCGCCGTGTTGTTGTACAC 588 Query 119225 ACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATT 119284 | ||||| || | | ||| | || | ||||||||| || ||| | || | Sbjct 589 TCTCAGCATGGGGACAAGACCGTTTGAGTTGCCATTTGTGCCGGCAAT--GTAGCTCCCT 646 Query 119285 G--GCTCTGACATCGTGGATGTGC-ATACCAATACCCCCTGCCCACTTTGAGATTTGCGC 119341 | | ||| | | | || ||| | || || || || || | || ||||| | || Sbjct 647 GTCGATCTAATACAGCTGA-CTGCTACGCCGATTCCTCCAGCTGATTTGGAGATGAGGGC 705 Query 119342 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAA 119401 ||||| | | ||| || | || || || || || ||| | || | || | ||||| Sbjct 706 GCACTGCTTCAGAGTGTCATAAATGCCTTCAATGCTGTCGTCTTTCATGGCTAGCAGGAA 765 Query 119402 GCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGAT 119461 |||||| |||| || |||||| || || || |||||||| || |||| ||||| | Sbjct 766 GCAGCTGGACAGCTGTGGCCTGTTGGTTCCTGCATTGAAGAGGGTAGGTGAGGCGTGTGT 825 Query 119462 GAACATACCT-TGGGACATCTTGTCGTAGGTCTC 119494 |||| || | | |||| | || ||||||||| Sbjct 826 GAAC-CACTTCTCAGACAGCAGGTTGTAGGTCTC 858 >seq1459 Length=39823 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| ||||||||||| | | ||| || || || |||||| ||| || ||||| || || Sbjct 12989 GTGCAGACCCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCC 13048 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||||| |||||| |||||| || || || |||||||||||||||||||| Sbjct 13049 GCGCTTCTTCAGCCAGAAGATCGCAGCGAACGACCCCGAGAAGAAGATCCCCTCCACGGC 13108 Query 130147 CGCGAACGCAAAGAGACGCTC 130167 |||||||| | || ||||| Sbjct 13109 AGCGAACGCCACGACTCGCTC 13129 >seq80 Length=1733396 Score = 95.1 bits (104), Expect = 1e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| ||||||| | |||||||||| |||| ||| ||||| ||||| Sbjct 121012 TAGATGTTGCTGGTGTAAGGCTCAATGGACTCATTGTTGCCCAGGATCTGGGCAGTGGAA 121071 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273 ||||||||||| || |||| ||| || ||||| Sbjct 121072 GCTGTGGGCATTGGGGCCAGGAGCAGACTGTT 121103 Score = 86.0 bits (94), Expect = 8e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 118739 CTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCC 118798 |||||| ||| |||||||| | ||| || ||||||| ||| | ||| |||||||| Sbjct 121963 CTCATCTTTACTTGTGTACTCGACAATCTCTGTGCACAGGTTGCTAGACTTGATGGTGCC 122022 Query 118799 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 118858 || |||| || || ||| |||| || || |||||||| ||||||||||| || || Sbjct 122023 CAGATTCTGCTGGTTGCTCTTCCTGTTGCATGCGTCCTTGTAGAGCATGTATGGTGTACC 122082 Query 118859 CGTCTCCGTTTGGGACT 118875 || || || || |||| Sbjct 122083 AGTTTCTGTCTGAGACT 122099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618331101894960