Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq86 239 5e-58 seq5694 179 4e-40 seq72 95.1 1e-14 seq80 86.0 7e-12 seq1459 84.2 3e-11 >seq86 Length=1688118 Score = 239 bits (264), Expect = 5e-58 Identities = 933/1443 (65%), Gaps = 28/1443 (2%) Strand=Plus/Plus Query 104267 GACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGC 104325 ||||| ||| | | | | ||||| ||| || | |||| | | || ||||| ||||| Sbjct 229218 GACATAGATGCAGCCATCGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACACACGC 229276 Query 104326 AACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTAT 104385 |||| |||||||||||||| || || || || || ||||||| |||||||| | Sbjct 229277 CTCACCTACCCTCTTCAATGCAGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCT 229336 Query 104386 CGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAAT 104445 |||| || || ||| || | || || |||| ||||| | | |||| || | || Sbjct 229337 AGCCATGAAAGACGACAGCATTGAAGGCATTTATGACACTCTGAAGCAGTGCGCCCTCAT 229396 Query 104446 CTCAAAGTGGGCTGGGGGTATTGGGAT-GCA--CATCCATGATGTGAGAGCCA-ATAAAT 104501 ||| || | ||||| || || || | ||| || | || | | ||| | | | | Sbjct 229397 CTCCAAATCAGCTGGAGGAATCGGCGTAGCAGTCAGC--TG-TATTAGATCGACAGGGAG 229453 Query 104502 CTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTA 104561 || ||| || |||||||| | ||| | ||| || | || ||||| | || | | Sbjct 229454 CTAC-ATTGCCGGCACAAATGGCAACTCAAACGGTCTTGTCCCCATGCTGAGAGTGTACA 229512 Query 104562 ACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAGG----GATCTATCGCAGTC 104617 || ||| ||||| ||||| | || | ||| | ||||| || | |||| | Sbjct 229513 ACAACACGGCGCGTTATGTCGACCAGGGTGGAAA-CAAAAGGCCCGGAGCCTTCGCCATG 229571 Query 104618 TATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGT 104677 || |||||||| |||||| ||| | | || ||| | ||| || ||| ||| Sbjct 229572 TACCTTGAGCCCTGGCACTTTGATGTGTTTGACTTCTTGGAGCTGAAGAAGAACACAGGA 229631 Query 104678 GACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATG 104737 | |||||| | | | | || ||||||| ||| | ||||| || || || |||||| Sbjct 229632 AAGGAGGAGCAGAGAGCCAGAGACCTCTTCTACGCCATGTGGATCCCCGACCTGTTCATG 229691 Query 104738 AAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTC 104797 || ||||| ||| | | |||||||| | ||||| | || ||||| || Sbjct 229692 AAAAGAGTAGAGAGCAACCAGGACTGGTCTCTGATGTGTCCTAATGAGTGCCCTGGGCTG 229751 Query 104798 TCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG 104856 || ||| | ||| ||||||||||| |||||||| || ||| | || || | Sbjct 229752 GATGAGTGCTGGGGG-GAGGAGTTTGAGAAGCTTTACACCTCATATGAGAAGGAGGGGAG 229810 Query 104857 GGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCG 104915 || || ||| |||| |||| | |||||| | || || || |||| || || | Sbjct 229811 GGTGAA-GCGTGTGGTGAAAGCTCAGCAGGTGTGGCACGCAATCATCGAGTCCCAGACAG 229869 Query 104916 AGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGA 104975 | || ||||| |||||||||||||| ||||||||||| ||| ||||| || || ||| Sbjct 229870 AAACAGGTACTCCATACATGCTTTATAAAGACGCCTGCAACAGAAAGACCAACCATCAGA 229929 Query 104976 ATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAG 105035 || |||| |||||||| ||| ||||| ||||||||| | |||| || | | | Sbjct 229930 ATCTGGGCACCATCAAGAGCAGCAACCTCTGCACAGAAATCGTTGAATACACCAGCCATG 229989 Query 105036 ATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGA 105095 |||| || || ||||| || || || || || ||| || |||||| | ||| Sbjct 229990 ATGAAGTAGCCGTTTGTAATCTGGCTTCCATTGCACTCAACATGTATGTCACCTCTGAG- 230048 Query 105096 CAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAA 105155 ||| ||||| | | | ||||| || || || ||| | || ||| ||| | | Sbjct 230049 --CGGACTTTTGACTTTAAGAAACTAGCTGACGTCACCAAAGTTATCGTCAAGAACTTGA 230106 Query 105156 ACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGAC 105215 ||| | || || | || || || || || | || || || || | | | | Sbjct 230107 ACAAGATCATCGAGATCAACTTCTATCCTGTACCGGAGGCCGAGAAGTCAAACAAGCGTC 230166 Query 105216 ACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG 105275 || | || |||||| |||| ||||||||| | || || | ||||| || || || Sbjct 230167 ACAGGCCGATTGGTATCGGCGTTCAGGGTTTGGCTGACGCCTTCATCCTCATGCGGTACC 230226 Query 105276 CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACG 105335 | ||||| | || || || | || | ||| |||||||| || || ||| Sbjct 230227 CGTTTGAAAGCCCAGAGGCCCAGTTGCTGAACATTCACATCTTTGAGACGATCTACTACG 230286 Query 105336 CCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 105395 |||| |||||||| || | ||| |||| | | || || || || || | || | Sbjct 230287 CCGCCCTTGAGGCAAGCTGCGAGCTGGCTGCCGAGCTCGGCCCGTACGAGACTTACGAAG 230346 Query 105396 GTTCTCCAGCTTCA-CAAGGGG-TGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT 105453 | ||||| | ||| ||||||| | || || | || |||||||| || ||| Sbjct 230347 GGTCTCCGG--TCAGCAAGGGGATTCTGCAGTACGACATGTGGGAGAAGAAGCCCACCGA 230404 Query 105454 TCACTACGACTGGGAAGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 105512 | | |||| ||||||| || ||||| ||| | | || | | ||||| | Sbjct 230405 CCTGTTGGACT-GGAAGCTGCTGAAGGAGAAGATCGCCAAACATGGCGTGAGGAACAGCC 230463 Query 105513 TCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 105572 | || | || || ||||| || |||||||||||||| ||| |||| || || || | | Sbjct 230464 TGCTGCTCGCCCCGATGCCCACCGCCTCCACCGCACAGATCCTGGGCAACAACGAGTCCA 230523 Query 105573 TTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTG 105632 | || ||||||| | |||||||| | ||| ||| | ||||||||| ||| | Sbjct 230524 TCGAGGCCTACACCAGCAACATCTACACCCGCAGAGTCCTGTCTGGAGAGTTTCAGATCG 230583 Query 105633 TCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGG 105692 ||||| ||||| | | ||||| | |||| || || ||| | |||| |||||| Sbjct 230584 TCAACCCTCATCTGCTCAAAGACCTGACGGAGAAGGGGCTGTGGAGCGAGGAGATGAAGA 230643 Query 105693 ATC 105695 ||| Sbjct 230644 ATC 230646 >seq5694 Length=14491 Score = 179 bits (198), Expect = 4e-40 Identities = 547/829 (66%), Gaps = 20/829 (2%) Strand=Plus/Minus Query 104267 GACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGC 104325 ||||| ||| | | | | ||||| ||| || | |||| | | || ||||| ||||| Sbjct 876 GACATAGATGCAGCCATCGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACACACGC 818 Query 104326 AACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTAT 104385 |||| |||||||||||||| || || || || || ||||||| |||||||| | Sbjct 817 CTCACCTACCCTCTTCAATGCAGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCT 758 Query 104386 CGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAAT 104445 |||| || || ||| || | || || |||| ||||| | | |||| || | || Sbjct 757 AGCCATGAAAGACGACAGCATTGAAGGCATTTATGACACTCTGAAGCAGTGCGCCCTCAT 698 Query 104446 CTCAAAGTGGGCTGGGGGTATTGGGAT-GCA--CATCCATGATGTGAGAGCCA-ATAAAT 104501 ||| || | ||||| || || || | ||| || | || | | ||| | | | | Sbjct 697 CTCCAAATCAGCTGGAGGAATCGGCGTAGCAGTCAGC--TG-TATTAGATCGACAGGGAG 641 Query 104502 CTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTA 104561 || ||| || |||||||| | ||| | ||| || | || ||||| | || | | Sbjct 640 CTAC-ATTGCCGGCACAAATGGCAACTCAAACGGTCTTGTCCCCATGCTGAGAGTGTACA 582 Query 104562 ACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAGG----GATCTATCGCAGTC 104617 || ||| ||||| ||||| | || | ||| | ||||| || | |||| | Sbjct 581 ACAACACGGCGCGTTATGTCGACCAGGGTGGAAA-CAAAAGGCCCGGAGCCTTCGCCATG 523 Query 104618 TATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGT 104677 || |||||||| |||||| ||| | | || ||| | ||| || ||| ||| Sbjct 522 TACCTTGAGCCCTGGCACTTTGATGTGTTTGACTTCTTGGAGCTGAAGAAGAACACAGGA 463 Query 104678 GACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATG 104737 | |||||| | | | | || ||||||| ||| | ||||| || || || |||||| Sbjct 462 AAGGAGGAGCAGAGAGCCAGAGACCTCTTCTACGCCATGTGGATCCCCGACCTGTTCATG 403 Query 104738 AAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTC 104797 || ||||| ||| | | |||||||| | ||||| | || ||||| || Sbjct 402 AAAAGAGTAGAGAGCAACCAGGACTGGTCTCTGATGTGTCCTAATGAGTGCCCTGGGCTG 343 Query 104798 TCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG 104856 || ||| |||| ||||||||||| |||||||| || ||| | || || | Sbjct 342 GATGAGTGC--TGGGGGAGGAGTTTGAGAAGCTTTACACCTCATATGAGAAGGAGGGGAG 285 Query 104857 GGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCG 104915 || || ||| |||| |||| | |||||| | || || || |||| || || | Sbjct 284 GGTGAA-GCGTGTGGTGAAAGCTCAGCAGGTGTGGCACGCAATCATCGAGTCCCAGACAG 226 Query 104916 AGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGA 104975 | || ||||| |||||||||||||| ||||||||||| ||| ||||| || || ||| Sbjct 225 AAACAGGTACTCCATACATGCTTTATAAAGACGCCTGCAACAGAAAGACCAACCATCAGA 166 Query 104976 ATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAG 105035 || |||| |||||||| ||| ||||| ||||||||| | |||| || | | | Sbjct 165 ATCTGGGCACCATCAAGAGCAGCAACCTCTGCACAGAAATCGTTGAATACACCAGCCATG 106 Query 105036 ATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 105084 |||| || || ||||| || || || || || ||| || |||||| Sbjct 105 ATGAAGTAGCCGTTTGTAATCTGGCTTCCATTGCACTCAACATGTATGT 57 >seq72 Length=1853568 Score = 95.1 bits (104), Expect = 1e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||| | |||||||| | || || || || ||||| |||||||||||||| || | Sbjct 1652303 CCTTAGGGGAGCGACTTGTGGCTTTCGCAGCAGTGGAGGGCATCTTCTTCTCTGGCTCAT 1652244 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || || || |||||||| |||||| |||| || ||||||||||| || |||||||| Sbjct 1652243 TCGCTGCCATCTATTGGCTGAAGAAGAGAGGACTAATGCCAGGTCTTACCTACTCCAACG 1652184 Query 94916 AGCTTAT 94922 |||| || Sbjct 1652183 AGCTGAT 1652177 >seq80 Length=1733396 Score = 86.0 bits (94), Expect = 7e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 105506 AACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 105565 |||||||| ||| |||| |||||||| ||||| ||||| || || ||| |||| || ||| Sbjct 121103 AACAGTCTGCTCCTGGCCCCAATGCCCACAGCTTCCACTGCCCAGATCCTGGGCAACAAT 121044 Query 105566 GAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTT 105625 || | | |||| || ||||| | |||||||| | | || ||| ||||||||||| Sbjct 121043 GAGTCCATTGAGCCTTACACCAGCAACATCTACACGCGCAGGGTACTCTCGGGAGAGTTT 120984 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 104904 AGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGA 104963 ||||||| || || |||||||||||||||||||| ||||| ||||| || ||| |||| Sbjct 122099 AGTCTCAGACAGAAACTGGTACACCATACATGCTCTACAAGGACGCATGCAACAGGAAGA 122040 Query 104964 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAAT 105023 | || || ||||| |||| |||||| | ||| || || ||||| || | || | Sbjct 122039 GCAACCAGCAGAATCTGGGCACCATCAAGTCTAGCAACCTGTGCACAGAGATTGTCGAGT 121980 Query 105024 TTACAGACAAAGATGAG 105040 ||| ||||||||| Sbjct 121979 ACACAAGTAAAGATGAG 121963 >seq1459 Length=39823 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 94863 |||||| || | || || || || ||||| ||||||||||| || || ||| || Sbjct 13129 GAGCGAGTCGTGGCGTTCGCTGCCGTGGAGGGGATCTTCTTCTCGGGGTCGTTCGCTGCG 13070 Query 94864 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923 || | ||||| |||||||| || || ||||| || || ||||||||||||||| ||| Sbjct 13069 ATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGATC 13010 Query 94924 TCTCGTGACGAGGGACTCCAC 94944 | |||||||| || ||| Sbjct 13009 AGCAGAGACGAGGGTCTGCAC 12989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583162622625840