Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq285 149 5e-31 seq159 102 7e-17 >seq285 Length=713875 Score = 149 bits (164), Expect = 5e-31 Identities = 130/162 (80%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 ||||| |||| ||| || |||||||| || || || | ||||||||||| ||| || || Sbjct 56041 AGCCCTGTGATGTGTGCGATCATGTAGGTAAGAAGCGCGTAGCTGGCGACGTTGAAAGGC 56100 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || ||||| |||||||| ||||| | |||||| ||||| || || ||||| ||||| | | Sbjct 56101 ACGCCGAGGCCCATGTCACCCGAGCGCTGGTACAGCTGGCAGGACAGCTCGCCGTCACAC 56160 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATG 30103 ||||| |||||||| | ||||||||| || || || |||||| Sbjct 56161 ACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCATG 56202 Score = 136 bits (150), Expect = 3e-27 Identities = 131/168 (78%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||||| ||||||||||| || || |||||||||||||| || ||||| || || ||||| Sbjct 56651 CATGTTTGTGTACTCTGCACCAAAGTGCCTCCACTGGAATCCATACACAGGACCGAGGTC 56710 Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342 ||||| ||||| | ||| || ||||| | ||||| | ||| |||||||| || Sbjct 56711 GCCCTCCTCCCTCTCTGTGAACCCGAGGTTGTCGAGGAAGTCCCGGGAGCCGTTGGCATC 56770 Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 ||| ||||| ||||| ||||| |||||||| |||| ||| || ||||| Sbjct 56771 CCAAATCTTCACCCCTTTCTCCGAGAGCTCCTTGGCGTTCGTCGACCC 56818 >seq159 Length=1183618 Score = 102 bits (112), Expect = 7e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 110159 ACTCTGGCAGTAGACGATATCTCTCTAGACTTTTCTCTGGGAGAAAAGTGTCGCACGCAA 110218 |||||||||| ||||| ||| | ||| |||| | || |||||||| ||||||||| ||| Sbjct 942206 ACTCTGGCAGCAGACGGTATTTATCTGGACTGATTTCAGGGAGAAATGTGTCGCACTCAA 942147 Query 110219 ATTGCGTCGACACGTGAGTGACAAACAGCCTCTTTATCCCCGGGCTCTCCATGAGCTCC 110277 | ||| || | | || ||||||||||| ||| | |||||| ||||||||| | |||| Sbjct 942146 ACTGCTTCAAGATTTGTGTGACAAACAGTCTCCTGCTCCCCGAGCTCTCCATCATCTCC 942088 Score = 96.9 bits (106), Expect = 3e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 110406 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 110465 || |||||||||||| | ||| ||||||| | | |||||| || || || ||||| || Sbjct 940314 CTGCCTGCTGAGGACGATGTTGATCCTGTTGTTTAAAGGTCTGTTTTTCTCCGGGATTGA 940255 Query 110466 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 |||||| ||||| || ||||| |||||||| |||||||| ||| Sbjct 940254 GAACCACGTCTTCCTGCCCATGATCACCACATTCTGCTTACCT 940212 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 110560 AGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACGCG 110619 ||||| | |||||||||||||| | |||||| ||||||| |||| ||| |||||| | Sbjct 938398 AGTCTAACGGGATGCCACGGCAGGTTTCCGTTCATCCCGATCCCCAGGTCAGGACACACC 938339 Query 110620 GCCACGATACCGTTCAGAATGAGGGGCAT 110648 |||||||||||||||| | ||||||| Sbjct 938338 GCCACGATACCGTTCAATACACGGGGCAT 938310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406243717606872