Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03]
13,466 sequences; 805,480,521 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq349 104 1e-17
>seq349
Length=568042
Score = 104 bits (114), Expect = 1e-17
Identities = 166/234 (71%), Gaps = 6/234 (3%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||||| || | ||||| ||| |||||| || ||||| || || ||
Sbjct 322044 GCCTCCCCTCAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 321985
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || ||||| |||||||| || | | ||| ||||| || ||
Sbjct 321984 GAGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGG 321925
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655
| ||||||||||| ||| ||||| || || | ||| |||| ||| | |||
Sbjct 321924 GATGCCCTCCTTGTCCTGGAT-TTTTGCCTTGACATTCTCAATGGTGTCACTTGG--CTC 321868
Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
||| || | ||| || || || || || | || |||||||| |||||||| ||
Sbjct 321867 CACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATTTT 321814
Score = 100 bits (110), Expect = 2e-16
Identities = 164/232 (71%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||||| || | ||||| ||| |||||| || ||||| || || ||
Sbjct 322728 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 322669
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || || ||||| ||||| || | | ||| || || || ||
Sbjct 322668 GAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 322609
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655
| ||||||||||| |||| || | || || | ||| |||| ||| | |||
Sbjct 322608 AATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTTGG--CTC 322552
Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||| |||| ||| || ||||| || || | || |||||||| |||||||||
Sbjct 322551 CACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 322500
Score = 100 bits (110), Expect = 2e-16
Identities = 164/232 (71%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||||| || | ||||| ||| |||||| || ||||| || || ||
Sbjct 323184 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 323125
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || || ||||| ||||| || | | ||| || || || ||
Sbjct 323124 GAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 323065
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655
| ||||||||||| |||| || | || || | ||| |||| ||| | |||
Sbjct 323064 AATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTTGG--CTC 323008
Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||| |||| ||| || ||||| || || | || |||||||| |||||||||
Sbjct 323007 CACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 322956
Score = 100 bits (110), Expect = 2e-16
Identities = 163/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||||| || | ||||| ||| |||||| || ||||| || || ||
Sbjct 326746 GCCTCCCCTCAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 326687
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || || || |||||||| || | | ||| ||||| || ||
Sbjct 326686 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGG 326627
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGT--CTTCGCTCTCC 34656
| ||||||||||| |||||| || | | ||| |||| ||| | ||||
Sbjct 326626 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTTGG--CTCC 326569
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
|| || | ||| || || || || || | || |||||||| |||||||||||
Sbjct 326568 ACCTCTAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGTT 326516
Score = 98.7 bits (108), Expect = 6e-16
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || ||||||| || | ||||| ||| |||||| || ||||| || || ||
Sbjct 327201 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 327142
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||| || || ||||| ||||| || | | ||| || || || ||
Sbjct 327141 AGGGTGCGGCCGTCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGA 327082
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTCC 34656
| ||||||||||| |||| || | || || | ||| |||| ||| | ||||
Sbjct 327081 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTTGG--CTCC 327025
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || | ||| || ||||| || || | || |||||||| |||||||||
Sbjct 327024 ACCTCTAGGGTGATTGTTTTGCCTGTGAGGGTCTTCACAAAGATCTGCATG 326974
Score = 95.1 bits (104), Expect = 8e-15
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||||| || | ||||| ||| |||||| || ||||| || || ||
Sbjct 322500 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 322441
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || ||||||| || || ||||| ||||| || | | ||| || || || ||
Sbjct 322440 GAGGGTGCGGCCGTCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 322381
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655
| ||||||||||| |||| || | || || | ||| |||| ||| | |||
Sbjct 322380 AATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTTGG--CTC 322324
Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||| || | ||| || || |||||||| | || || || || |||||||||
Sbjct 322323 CACCTCTAGGGTGATGGTCTTACCGGTAAGGGTCTTGACGAAGATCTGCATG 322272
Score = 91.5 bits (100), Expect = 9e-14
Identities = 160/231 (69%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||||| || | ||||| ||| |||||| || ||||| || || ||
Sbjct 322956 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 322897
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || || ||||| ||||| || | | ||| || || || ||
Sbjct 322896 GAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGGGG 322837
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGT--CTTCGCTCTCC 34656
| ||||||||||| |||||| || | | ||| |||| ||| | ||||
Sbjct 322836 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTTGG--CTCC 322779
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| |||| ||| || ||||| || || | || || || || |||||||||
Sbjct 322778 ACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCATG 322728
Score = 91.5 bits (100), Expect = 9e-14
Identities = 162/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||||| || | ||||| ||| || || || ||||| || || ||
Sbjct 326974 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGA 326915
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || || ||||| ||||| || | | ||| || || || ||
Sbjct 326914 GAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 326855
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655
| ||||||||||| |||| || | || ||| | ||| |||| ||| | |||
Sbjct 326854 AATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTCTCAATGGTGTCACTTGG--CTC 326798
Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||||||| ||| || || ||||| || | || || || || |||||||||
Sbjct 326797 CACTTCCAGGGTGATGGTCTTACCAGTGAGGGTCTTGACGAAGATCTGCATG 326746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314677947561578
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |