Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq349 104 1e-17 >seq349 Length=568042 Score = 104 bits (114), Expect = 1e-17 Identities = 166/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||||| || | ||||| ||| |||||| || ||||| || || || Sbjct 322044 GCCTCCCCTCAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 321985 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| || ||||| |||||||| || | | ||| ||||| || || Sbjct 321984 GAGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGG 321925 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655 | ||||||||||| ||| ||||| || || | ||| |||| ||| | ||| Sbjct 321924 GATGCCCTCCTTGTCCTGGAT-TTTTGCCTTGACATTCTCAATGGTGTCACTTGG--CTC 321868 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 ||| || | ||| || || || || || | || |||||||| |||||||| || Sbjct 321867 CACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATTTT 321814 Score = 100 bits (110), Expect = 2e-16 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||||| || | ||||| ||| |||||| || ||||| || || || Sbjct 322728 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 322669 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| || || ||||| ||||| || | | ||| || || || || Sbjct 322668 GAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 322609 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655 | ||||||||||| |||| || | || || | ||| |||| ||| | ||| Sbjct 322608 AATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTTGG--CTC 322552 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| |||| ||| || ||||| || || | || |||||||| ||||||||| Sbjct 322551 CACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 322500 Score = 100 bits (110), Expect = 2e-16 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||||| || | ||||| ||| |||||| || ||||| || || || Sbjct 323184 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 323125 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| || || ||||| ||||| || | | ||| || || || || Sbjct 323124 GAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 323065 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655 | ||||||||||| |||| || | || || | ||| |||| ||| | ||| Sbjct 323064 AATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTTGG--CTC 323008 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| |||| ||| || ||||| || || | || |||||||| ||||||||| Sbjct 323007 CACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 322956 Score = 100 bits (110), Expect = 2e-16 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||||| || | ||||| ||| |||||| || ||||| || || || Sbjct 326746 GCCTCCCCTCAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 326687 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| || || || |||||||| || | | ||| ||||| || || Sbjct 326686 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGG 326627 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGT--CTTCGCTCTCC 34656 | ||||||||||| |||||| || | | ||| |||| ||| | |||| Sbjct 326626 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTTGG--CTCC 326569 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || || | ||| || || || || || | || |||||||| ||||||||||| Sbjct 326568 ACCTCTAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGTT 326516 Score = 98.7 bits (108), Expect = 6e-16 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||||| || | ||||| ||| |||||| || ||||| || || || Sbjct 327201 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 327142 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||| || || ||||| ||||| || | | ||| || || || || Sbjct 327141 AGGGTGCGGCCGTCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGA 327082 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTCC 34656 | ||||||||||| |||| || | || || | ||| |||| ||| | |||| Sbjct 327081 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTTGG--CTCC 327025 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || | ||| || ||||| || || | || |||||||| ||||||||| Sbjct 327024 ACCTCTAGGGTGATTGTTTTGCCTGTGAGGGTCTTCACAAAGATCTGCATG 326974 Score = 95.1 bits (104), Expect = 8e-15 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||||| || | ||||| ||| |||||| || ||||| || || || Sbjct 322500 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 322441 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || ||||||| || || ||||| ||||| || | | ||| || || || || Sbjct 322440 GAGGGTGCGGCCGTCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 322381 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655 | ||||||||||| |||| || | || || | ||| |||| ||| | ||| Sbjct 322380 AATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTTGG--CTC 322324 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| || | ||| || || |||||||| | || || || || ||||||||| Sbjct 322323 CACCTCTAGGGTGATGGTCTTACCGGTAAGGGTCTTGACGAAGATCTGCATG 322272 Score = 91.5 bits (100), Expect = 9e-14 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||||| || | ||||| ||| |||||| || ||||| || || || Sbjct 322956 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 322897 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| || || ||||| ||||| || | | ||| || || || || Sbjct 322896 GAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGGGG 322837 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGT--CTTCGCTCTCC 34656 | ||||||||||| |||||| || | | ||| |||| ||| | |||| Sbjct 322836 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTTGG--CTCC 322779 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || |||| ||| || ||||| || || | || || || || ||||||||| Sbjct 322778 ACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCATG 322728 Score = 91.5 bits (100), Expect = 9e-14 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||||| || | ||||| ||| || || || ||||| || || || Sbjct 326974 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGA 326915 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| || || ||||| ||||| || | | ||| || || || || Sbjct 326914 GAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 326855 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655 | ||||||||||| |||| || | || ||| | ||| |||| ||| | ||| Sbjct 326854 AATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTCTCAATGGTGTCACTTGG--CTC 326798 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||||||| ||| || || ||||| || | || || || || ||||||||| Sbjct 326797 CACTTCCAGGGTGATGGTCTTACCAGTGAGGGTCTTGACGAAGATCTGCATG 326746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314677947561578