Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq285 129 5e-25 >seq285 Length=713875 Score = 129 bits (142), Expect = 5e-25 Identities = 118/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| || || || ||||| || || | |||||| ||||| || | ||| Sbjct 56053 TGTGCGATCATGTAGGTAAGAAGCGCGTAGCTGGCGACGTTGAAAGGCACGCCGAGGCCC 56112 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||| ||||| || || || ||||||||||||||||| || | |||||||| || Sbjct 56113 ATGTCACCCGAGCGCTGGTACAGCTGGCAGGACAGCTCGCCGTCACACACGTAGAACTGA 56172 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCAT 6768 ||||||| |||||| ||||| |||||||| Sbjct 56173 CAGAGGGCGTGGCAGGGGGGCAGCGCCAT 56201 Score = 129 bits (142), Expect = 5e-25 Identities = 118/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 34577 ATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCC 34636 |||||||| ||||| |||||| ||||||| || |||||||| | || ||||||||| Sbjct 56201 ATGGCGCTGCCCCCCTGCCACGCCCTCTGTCAGTTCTACGTGTGTGACGGCGAGCTGTCC 56142 Query 34637 TGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGT 34696 |||||||| || || || ||||| |||||||| | || ||||| |||||| | || || Sbjct 56141 TGCCAGCTGTACCAGCGCTCGGGTGACATGGGCCTCGGCGTGCCTTTCAACGTCGCCAGC 56082 Query 34697 TACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || || ||||||||||| || Sbjct 56081 TACGCGCTTCTTACCTACATGATCGCACA 56053 Score = 125 bits (138), Expect = 6e-24 Identities = 123/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 ||||| || |||||||| ||||||||||| || || || || || | ||||||||||||| Sbjct 56661 TACTCTGCACCAAAGTGCCTCCACTGGAATCCATACACAGGACCGAGGTCGCCCTCCTCC 56720 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | || |||||| | ||||| || ||||| || || |||| || ||||| |||||| Sbjct 56721 CTCTCTGTGAACCCGAGGTTGTCGAGGAAGTCCCGGGAGCCGTTGGCATCCCAAATCTTC 56780 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCC 7057 ||||| |||||||||||||| |||||| | |||| Sbjct 56781 ACCCCTTTCTCCGAGAGCTCCTTGGCGTTCGTCGACCCC 56819 Score = 125 bits (138), Expect = 6e-24 Identities = 123/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 34288 GGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGG 34347 |||| | |||||| |||||||||||||| ||||||||||| ||||| || |||| Sbjct 56819 GGGGTCGACGAACGCCAAGGAGCTCTCGGAGAAAGGGGTGAAGATTTGGGATGCCAACGG 56760 Query 34348 GTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCC 34407 || || ||||| || ||||| | |||||| || |||||||||||||| | || || Sbjct 56759 CTCCCGGGACTTCCTCGACAACCTCGGGTTCACAGAGAGGGAGGAGGGCGACCTCGGTCC 56700 Query 34408 GGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || || || ||||||||||| |||||||| || ||||| Sbjct 56699 TGTGTATGGATTCCAGTGGAGGCACTTTGGTGCAGAGTA 56661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448186946231520