Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq349 168 2e-36 seq4673 156 1e-32 seq183 95.1 3e-14 >seq349 Length=568042 Score = 168 bits (186), Expect = 2e-36 Identities = 169/218 (78%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 326730 AGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 326671 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || ||||| || |||| || ||||||||| Sbjct 326670 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 326611 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| || || ||||| |||||||| |||| || ||||| || ||||| Sbjct 326610 TGGATCTTGGCCTTGACATTTTCAATGGTGTC---GCTTGGCTCCACCTCTAGGGTGATG 326554 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || ||||| ||||| ||||| | |||||| || Sbjct 326553 GTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGTT 326516 Score = 163 bits (180), Expect = 7e-35 Identities = 166/215 (77%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || ||||| ||||| |||||||| || || | ||||| | |||||| Sbjct 322256 AGGACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 322197 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| ||||| || ||||| || | || || || || |||| |||||||||||| Sbjct 322196 TCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 322137 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| || || || || ||||||||| ||| || ||||| | ||||| Sbjct 322136 TGGATCTTGGCCTTGACATTCTCAATGGTGTCA---CTTGGCTCCACCTCCAAGGTGATG 322080 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||| ||||| ||||| | |||||| Sbjct 322079 GTCTTTCCAGTGAGGGTCTTCACAAAGATCTGCAT 322045 Score = 159 bits (176), Expect = 8e-34 Identities = 167/218 (77%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 322028 AGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 321969 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| ||||| || ||||| || | || ||||| || || | || ||||||||| Sbjct 321968 TCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 321909 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 ||||| ||| || || || || ||||||||| ||| || ||||| || ||||| Sbjct 321908 TGGATTTTTGCCTTGACATTCTCAATGGTGTCA---CTTGGCTCCACCTCAAGGGTGATG 321852 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || ||||| ||||| ||||| | ||||||||| Sbjct 321851 GTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATTTT 321814 Score = 154 bits (170), Expect = 3e-32 Identities = 164/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 322712 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 322653 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| || | || || || || |||| || ||||||||| Sbjct 322652 TCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 322593 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| || || || || |||||||| |||| || ||||| || ||||| Sbjct 322592 TGGATCTTGGCCTTGACATTCTCAATGGTGTC---GCTTGGCTCCACCTCCAGGGTGATT 322536 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| ||||| ||||| | |||||| Sbjct 322535 GTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 322501 Score = 154 bits (170), Expect = 3e-32 Identities = 164/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 323168 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 323109 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| || | || || || || |||| || ||||||||| Sbjct 323108 TCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 323049 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| || || || || |||||||| |||| || ||||| || ||||| Sbjct 323048 TGGATCTTGGCCTTGACATTCTCAATGGTGTC---GCTTGGCTCCACCTCCAGGGTGATT 322992 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| ||||| ||||| | |||||| Sbjct 322991 GTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 322957 Score = 154 bits (170), Expect = 3e-32 Identities = 164/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || ||||| ||||| |||||||| || || | ||||| | |||||| Sbjct 326958 AGGACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 326899 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| || | || || || || |||| || ||||||||| Sbjct 326898 TCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 326839 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| || ||||| || ||||||||| ||| || || || || ||||| Sbjct 326838 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCA---CTTGGCTCCACTTCCAGGGTGATG 326782 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || ||||| ||||| || || | |||||| Sbjct 326781 GTCTTACCAGTGAGGGTCTTGACGAAGATCTGCAT 326747 Score = 150 bits (166), Expect = 4e-31 Identities = 163/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 322940 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 322881 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || || || || | || || || || |||| || ||||||||| Sbjct 322880 TCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 322821 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| || || ||||| |||||||| |||| || ||||| || ||||| Sbjct 322820 TGGATCTTGGCCTTGACATTTTCAATGGTGTC---GCTTGGCTCCACCTCCAGGGTGATT 322764 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| ||||| || || | |||||| Sbjct 322763 GTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 322729 Score = 150 bits (166), Expect = 4e-31 Identities = 163/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||| || || |||||||| || |||||||| || || | ||||| | || ||| Sbjct 323396 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 323337 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || || || || |||| |||||||||||| Sbjct 323336 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 323277 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| || || || || |||||||| |||| || ||||| || ||||| Sbjct 323276 TGGATCTTAGCCTTGACATTCTCAATGGTGTC---GCTTGGCTCCACCTCCAGGGTGATT 323220 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| ||||| || || | |||||| Sbjct 323219 GTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 323185 Score = 150 bits (166), Expect = 4e-31 Identities = 163/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || |||||||| || |||||||| || || | ||||| | || ||| Sbjct 327186 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 327127 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| || | || || || || |||| || ||||||||| Sbjct 327126 TCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 327067 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| || || || || |||||||| |||| || ||||| || ||||| Sbjct 327066 TGGATCTTGGCCTTGACATTCTCAATGGTGTC---GCTTGGCTCCACCTCTAGGGTGATT 327010 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| ||||| ||||| | |||||| Sbjct 327009 GTTTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 326975 Score = 145 bits (160), Expect = 2e-29 Identities = 162/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || |||||||| || |||||||| || || | ||||| | || ||| Sbjct 322484 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 322425 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| || | || || || || |||| || ||||||||| Sbjct 322424 TCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 322365 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| || || || || |||||||| |||| || ||||| || ||||| Sbjct 322364 TGGATCTTGGCCTTGACATTCTCAATGGTGTC---GCTTGGCTCCACCTCTAGGGTGATG 322308 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || ||||| || || | |||||| Sbjct 322307 GTCTTACCGGTAAGGGTCTTGACGAAGATCTGCAT 322273 >seq4673 Length=16361 Score = 156 bits (172), Expect = 1e-32 Identities = 166/218 (76%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 2479 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 2538 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || || || || || || || | |||||||| ||| Sbjct 2539 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGGGATCCCTTCCTTATCC 2598 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| || || ||||| || |||||| ||| || ||||| | |||||| Sbjct 2599 TGGATCTTGGCCTTGACATTTTCAATTGTGTCA---CTTGGCTCCACCTCCAAAGTGATG 2655 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || || ||||| ||||| | |||||| || Sbjct 2656 GTCTTCCCGGTTAGGGTCTTCACAAAGATCTGCATCTT 2693 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || |||||||| ||||| |||||||| || || | ||||| | |||||| Sbjct 2251 AGAACCAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 2310 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || || || || || || || | || || || ||| Sbjct 2311 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCGGGGGGGATACCCTCTTTATCC 2370 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| || |||||||| | || ||||| || ||||| ||| Sbjct 2371 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 2430 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | |||||| Sbjct 2431 TTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 2462 Score = 149 bits (164), Expect = 1e-30 Identities = 161/212 (76%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 2024 AGCACAAG-TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 2082 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || || || || || || || | |||||| || ||| Sbjct 2083 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGGGATTCCTTCTTTATCC 2142 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || |||||||| | || ||||| || ||||| ||| Sbjct 2143 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 2202 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | |||||| Sbjct 2203 TTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 2234 >seq183 Length=1045160 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 139822 GGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAAC 139881 || |||||||| || |||||||||||||||| | || ||| ||| ||||| |||||| Sbjct 407764 GGCAGAGGAGGGCAGTCTGCTCTGCGTTTTGCTCGTCTGAGAATGGAGAAGAGACACAAC 407823 Query 139882 TACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTAT---CAAAGACAACAAGTGT 139938 || |||||||||| || |||| || | ||| ||| | ||| |||| |||| | Sbjct 407824 TATGTGAGAAAAGTGGCTGAGACGGCTGTCCAGCTCTTTGTGTCCAACGACA--AAGT-T 407880 Query 139939 TTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGACAAAGCTCCTGGAATCT 139998 ||| |||| || || ||||| || || ||||| || |||||| | ||| | ||| Sbjct 407881 AATGTGGCTGGAATGGTCTTGGCTGGATCTGCAGACTTTAAGACAGAACTCAGCCAGTCT 407940 Query 139999 GACTTTTTTGACCC 140012 || | || ||||| Sbjct 407941 GATATGTTCGACCC 407954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158952007883090