Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq285 149 5e-31 seq159 98.7 8e-16 >seq285 Length=713875 Score = 149 bits (164), Expect = 5e-31 Identities = 130/162 (80%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 ||||| |||| ||| || |||||||| || || || | ||||||||||| ||| || ||| Sbjct 56041 AGCCCTGTGATGTGTGCGATCATGTAGGTAAGAAGCGCGTAGCTGGCGACGTTGAAAGGC 56100 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || ||||| |||||||| || || | |||||| |||||||| || ||||| ||||| | | Sbjct 56101 ACGCCGAGGCCCATGTCACCCGAGCGCTGGTACAGCTGGCAGGACAGCTCGCCGTCACAC 56160 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATG 29875 ||||| |||||||| | ||| ||||| || || || |||||| Sbjct 56161 ACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCATG 56202 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||||||||||||| || ||||| || || ||||| ||||| ||||| | ||| Sbjct 56673 AAGTGCCTCCACTGGAATCCATACACAGGACCGAGGTCGCCCTCCTCCCTCTCTGTGAAC 56732 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || ||||| | ||||| | ||| |||||||| ||||| ||||| ||||| ||||| Sbjct 56733 CCGAGGTTGTCGAGGAAGTCCCGGGAGCCGTTGGCATCCCAAATCTTCACCCCTTTCTCC 56792 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162 |||||||| |||| ||| || ||||| Sbjct 56793 GAGAGCTCCTTGGCGTTCGTCGACCC 56818 >seq159 Length=1183618 Score = 98.7 bits (108), Expect = 8e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 114042 ACTCTGGCAGTAGACGATATCTCTCTAGACTTTTCTCTGGGAGAAAAATGTCGCACGCAA 114101 |||||||||| ||||| ||| | ||| |||| | || |||||||| |||||||| ||| Sbjct 942206 ACTCTGGCAGCAGACGGTATTTATCTGGACTGATTTCAGGGAGAAATGTGTCGCACTCAA 942147 Query 114102 ATTGCGTCGACACGTGAGTGACAAACAGCCTCTTTGTCCCCGGGCTCTCCATGAGCTCC 114160 | ||| || | | || ||||||||||| ||| | |||||| ||||||||| | |||| Sbjct 942146 ACTGCTTCAAGATTTGTGTGACAAACAGTCTCCTGCTCCCCGAGCTCTCCATCATCTCC 942088 Score = 96.9 bits (106), Expect = 3e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348 || |||||||||||| | ||| | ||||| | | |||||| || || || ||||| || Sbjct 940314 CTGCCTGCTGAGGACGATGTTGATCCTGTTGTTTAAAGGTCTGTTTTTCTCCGGGATTGA 940255 Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 |||||| ||||| || ||||| |||||||| |||||||||||| Sbjct 940254 GAACCACGTCTTCCTGCCCATGATCACCACATTCTGCTTACCT 940212 Score = 89.7 bits (98), Expect = 4e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 114443 AGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACGCT 114502 ||||| || |||||||||||||| | |||||| ||||||| |||| ||| |||||| | Sbjct 938398 AGTCTAACGGGATGCCACGGCAGGTTTCCGTTCATCCCGATCCCCAGGTCAGGACACACC 938339 Query 114503 GCCACGATACCGTTCAGAATGAGGGGCAT 114531 |||||||||||||||| | ||||||| Sbjct 938338 GCCACGATACCGTTCAATACACGGGGCAT 938310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406096541764876