Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq285 140 2e-28 seq193 116 3e-21 >seq285 Length=713875 Score = 140 bits (154), Expect = 2e-28 Identities = 128/162 (79%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 ||||| |||| ||| || |||||||| || || || | ||||||||||| ||| || || Sbjct 56041 AGCCCTGTGATGTGTGCGATCATGTAGGTAAGAAGCGCGTAGCTGGCGACGTTGAAAGGC 56100 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || ||||| |||||||| ||||| | |||||| ||||| || || ||||| || || | Sbjct 56101 ACGCCGAGGCCCATGTCACCCGAGCGCTGGTACAGCTGGCAGGACAGCTCGCCGTCACAC 56160 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATG 27369 ||||| |||||||| | ||||||||| || || || |||||| Sbjct 56161 ACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCATG 56202 Score = 132 bits (146), Expect = 4e-26 Identities = 130/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||||| ||||||||||| || || |||||||| ||||| || ||||| || || ||||| Sbjct 56651 CATGTTTGTGTACTCTGCACCAAAGTGCCTCCACTGGAATCCATACACAGGACCGAGGTC 56710 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 ||||| ||||| | ||| || ||||| | ||||| | ||| |||||||| || Sbjct 56711 GCCCTCCTCCCTCTCTGTGAACCCGAGGTTGTCGAGGAAGTCCCGGGAGCCGTTGGCATC 56770 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 ||| ||||| ||||| ||||| |||||||| |||| ||| || ||||| Sbjct 56771 CCAAATCTTCACCCCTTTCTCCGAGAGCTCCTTGGCGTTCGTCGACCC 56818 >seq193 Length=1010057 Score = 116 bits (128), Expect = 3e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 69071 AGTGGTGAACGGATGGGGAAAGTTTTATATCCCCACCGCCGTGACGATGCAGGTCATCGG 69130 ||| ||| | || ||||||||||| ||| | || | || | ||||||||| | || Sbjct 740106 AGTCGTGGAAGGTTGGGGAAAGTTCTATCTTCCTGATGAGGTTAGGATGCAGGTTGTAGG 740165 Query 69131 TTATGTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATGACCTGCGAGGACCA 69190 || |||| |||||| ||| || ||||| | |||||| ||||||| ||| || || Sbjct 740166 TTTAGTGAAGGGAACCTCATGCCCCTGTGAGCTGCTTGTTCTGATGATCTGTGAAGATGG 740225 Query 69191 GAAGGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAACTGTCTGGATCAGAT 69250 ||| |||| | || || | ||| |||||||||| ||||||| | ||||||| ||| | Sbjct 740226 AAAGCTGTATGCTTACGATGAAGAGGAGCTGCATGAGGTGGCTTCCAGTCTGGAGCAGCT 740285 Query 69251 GGGGGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCATGGGGAGGCCTTCA 69309 | || ||| || ||||| ||| || | ||||||| | |||||| |||||| Sbjct 740286 CTGTACTGAGGGATTACAGTATCCATCATCCCTGTGCTATTACAAAGGGGAGACCTTCA 740344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369446557633046