Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq14 159 5e-34 seq209 116 5e-21 seq490 100 4e-16 >seq14 Length=2926375 Score = 159 bits (176), Expect = 5e-34 Identities = 180/241 (75%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 8345 GCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCC 8404 ||| | |||||||| |||| ||| | || ||||| |||||||||||||||||| || Sbjct 960418 GCGGTGTTGACGATTTCGAAGCCCGCAGTGCCTCCGAATGTGCTGGGCTTCCAGTACTCC 960359 Query 8405 GGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGA 8464 ||||| |||||| ||| |||| ||||| ||||||||||| || || |||| ||| | Sbjct 960358 GGGGAACAGATGGGGTTTCCCATTAGGCCCTTGAGGGAGAAAGGTGCTCCCATCTCTACC 960299 Query 8465 ATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGC 8524 ||| | || |||||||| ||||||| | ||| || ||||||| | || | ||| ||| Sbjct 960298 ATGGTTTCCCCGAAGATAGCGTTGGTCCTGGGTTTCTCCACCAGCAGACCTGGGTAAAGC 960239 Query 8525 TCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCT 8584 |||||||| ||||| | ||||| | || || |||||| || || || |||||| Sbjct 960238 TCCACAGCGTCGACATGCCCGTACATCTCCTCAAGAATGGCAGCCATTTCTTTCTCTCCT 960179 Query 8585 G 8585 | Sbjct 960178 G 960178 Score = 111 bits (122), Expect = 2e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || ||||| | ||||| || | |||||| || || |||||| ||| | || || Sbjct 958653 TCACCGATCAGAATGAGCCGTGCGGTCTGAAAGAGCCTCTCGTCGTCCCAGTAAGGGTGG 958594 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 | | |||| ||||| ||||||| ||||||||| | |||||||| |||||||||||| Sbjct 958593 ACCTCCTTCAACACATCACACACCCGGTTGTGTTCACGTAGCCAGATGGTGGCGTACATC 958534 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGC 9392 || || || || |||||||| |||||||| || || ||||| Sbjct 958533 ATCAGACCGGGGACCAGGCCGAAAGCCTCGTGGCCCACAGC 958493 >seq209 Length=958208 Score = 116 bits (128), Expect = 5e-21 Identities = 174/247 (70%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 8301 ACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCC 8360 ||||||||| |||| ||| || || || || | ||| || | || ||||| Sbjct 643342 ACGGACACCACTTGGTATTGAGGCACACCAGTTTCTTCAAAGTAGCCGTTTTCACGATAT 643283 Query 8361 CGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGT 8420 ||| ||| ||||| || |||||||||| |||||||||| | ||||||||||| | Sbjct 643282 TGAAGCCCGTCTCTCCTCCAAAGGTGCTGGACTTCCAGTACTCAGGGGAGCAGATTGGAT 643223 Query 8421 TCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGA 8480 | |||| ||||| || | ||||| ||||| |||| ||| | || |||||||| || | Sbjct 643222 TTCCCATCAGGCCCTTCAAAGAGAAGGGAGCACCCATCTCTACCATACTCTCACCAAATA 643163 Query 8481 TGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGT 8540 || ||| | ||| | || |||| | || || ||||| ||||| | ||| || | || Sbjct 643162 TGCCGTCAGAACGAGTTTTCTCCAATAGGACGCCAGTGTAAAGCTCTAAAGCATCTATGT 643103 Query 8541 CTCCGTA 8547 | ||||| Sbjct 643102 CACCGTA 643096 Score = 93.3 bits (102), Expect = 6e-14 Identities = 178/255 (70%), Gaps = 12/255 (5%) Strand=Plus/Minus Query 9224 TGATGGTTTCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATT 9283 ||||| || || || |||||||||| ||||||||||| || ||||| ||| ||| Sbjct 639953 TGATGCACTCACCAATGATGATGAGTCTGGTGGTCTGGAAGAGCTGCTCATCATCCCAGG 639894 Query 9284 CTGGATGTTCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGG 9343 ||||| ||| ||||| | || || || ||||| || | || ||||| | || | Sbjct 639893 TGGGATGCTCTGTCTTCAGGATGTCACAGACTCTGTTATG--CTCTCAGCCATACTGTAG 639836 Query 9344 CGTACATCATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGT 9403 ||||||| |||| || || | | |||||| |||| ||||| | || |||||| || Sbjct 639835 CGTACATGGTGAGGCCTGGCAGGATGCCAAACACCTCCTGACCAATGGCAAGACGC-TGC 639777 Query 9404 TTTCG---GGCA-CTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGAC-CGAGGG 9458 | | | || |||| |||||| | ||||||||| |||| || ||| | ||| Sbjct 639776 TCAGGAGTGACAGCTTC---AGGATACACCATGTGCACAGGGACCTCAGAGACTCTAGGA 639720 Query 9459 GGGATACATTTCACC 9473 ||| ||||| ||||| Sbjct 639719 GGG-TACATCTCACC 639706 >seq490 Length=353978 Score = 100 bits (110), Expect = 4e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 8361 CGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGT 8420 |||||||||| | || || |||||||||||||||||||| | || || || ||| || Sbjct 135720 CGAACCCCACTTTACCTCCAAAGGTGCTGGGCTTCCAGTATTCAGGAGAACATATGGGGT 135779 Query 8421 TCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGA 8480 | ||| ||||||||| || ||||| || || |||| ||| | ||||||||||| || | Sbjct 135780 TTCCCAGGAGGCCTTTAAGAGAGAAAGGGGCACCCATCTCCACCATGCTCTCACCAAATA 135839 Query 8481 TGG 8483 ||| Sbjct 135840 TGG 135842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716756131712640