Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Larimichthys_20crocea_20[refseq_20GCF_5F000972845.1_202015-04-21] 6,014 sequences; 678,938,134 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1327 86.0 5e-12 >seq1327 Length=1883937 Score = 86.0 bits (94), Expect = 5e-12 Identities = 123/171 (72%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 18966 CCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT-TGCAAACGGTGA 19024 ||||| |||| || || || || ||| | | |||||||| ||||| ||| | || || Sbjct 831853 CCCTTCATGGCTCTGCCCCCCTGCCACGCCCTGTGTCAGTTCTACGTGTGCGAT-GGCGA 831795 Query 19025 ATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACAT 19084 | || || || | |||||| | || || || |||||||| ||||| || ||||| || Sbjct 831794 GCTGTCGTGTCAGCTGTACCAGCGCTCAGGTGACATGGGCCTCGGGGTGCCTTTCAATAT 831735 Query 19085 TGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 || | ||||| |||||||||||||| | || || | || ||||| || Sbjct 831734 CGCCAGCTATGCGCTTCTTACCTACATGATCGCACACATCACCGGACTCAA 831684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399474718104630