Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Larimichthys_20crocea_20[refseq_20GCF_5F000972845.1_202015-04-21] 6,014 sequences; 678,938,134 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1327 100 2e-16 >seq1327 Length=1883937 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||| || |||||||| | || | || | |||||| || || || ||||||||||| Sbjct 831693 GTGATGTGTGCGATCATGTAGGTAAGAAGCGCATAGCTGGCGATATTGAAAGGCACCCCG 831752 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || ||||| ||| |||| | || || | |||||| || |||| ||||| ||||| || Sbjct 831753 AGGCCCATGTCACCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGCACACGTAG 831812 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||||| || | || |||||||||| ||||| Sbjct 831813 AACTGACACAGGGCGTGGCAGGGGGGCAGAGCCAT 831847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346758582249980