Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Larimichthys_20crocea_20[refseq_20GCF_5F000972845.1_202015-04-21] 6,014 sequences; 678,938,134 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1532 98.7 8e-16 >seq1532 Length=669350 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 ||||| || || || || || ||||||||||||| | || | |||||| | ||| Sbjct 291620 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCAAGCTGT 291679 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 ||||| ||| |||| || || || || || ||| | |||||||||||| || | Sbjct 291680 TTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCCTGGATCTTA 291739 Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302 |||||| | ||| ||||| | ||||||| |||| ||||||| | |||||||| Sbjct 291740 GCCTTGACGTTCTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCGGTG 291799 Query 18303 AATGTTTTTACAAAAATTTGCATTTTT 18329 | || || ||||| || ||||| ||| Sbjct 291800 AGGGTCTTGACAAAGATCTGCATGTTT 291826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379316195744430