Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Larimichthys_20crocea_20[refseq_20GCF_5F000972845.1_202015-04-21] 6,014 sequences; 678,938,134 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1327 123 2e-23 >seq1327 Length=1883937 Score = 123 bits (136), Expect = 2e-23 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || |||| ||| ||||||| || || || || || ||||||||||| || || || Sbjct 831687 AGTCCGGTGATGTGTGCGATCATGTAGGTAAGAAGCGCATAGCTGGCGATATTGAAAGGC 831746 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 ||||||||||||||||| | || | |||||||||||| || |||||||| || | Sbjct 831747 ACCCCGAGGCCCATGTCACCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGCAC 831806 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151 ||||| |||||||||| |||| || || || |||||||| Sbjct 831807 ACGTAGAACTGACACAGGGCGTGGCAGGGGGGCAGAGCCAT 831847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427744645890720