Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Larimichthys_20crocea_20[refseq_20GCF_5F000972845.1_202015-04-21] 6,014 sequences; 678,938,134 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq378 82.4 6e-11 >seq378 Length=1964660 Score = 82.4 bits (90), Expect = 6e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 15260 CCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCT 15319 ||||||||||| |||||| || ||| | |||||||| || || || || || Sbjct 434923 CCTTCTTTGTCTTGGATTTTGGCTTTGACATTGTCTATGGTGTCACTGGGCTCCACCTCG 434864 Query 15320 AAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15369 | ||| ||||||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct 434863 AGGGTGATGGTTTTACCCGTCAGCGTTTTCACAAAAATCTGCATCTTTGA 434814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362152653849174