Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Larimichthys_20crocea_20[refseq_20GCF_5F000972845.1_202015-04-21] 6,014 sequences; 678,938,134 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1327 82.4 7e-11 >seq1327 Length=1883937 Score = 82.4 bits (90), Expect = 7e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 20527 GTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCT 20586 |||| | ||||||||||| ||||||||||||||||| || ||||||| || || ||| Sbjct 832541 GTACTCTGCCCCAAAGTGTCTCCACTGGAAACCGTACACGGGTCCCAGGTCGCCTTCCTC 832600 Query 20587 TCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTT 20646 ||| | || | ||| | | ||||||| || | || || || ||||| ||||| Sbjct 832601 TCTATCCGTGAACCCGAGATTGTCCAGGAAGTCTCGAGACCCGTTGGCTTCCCAAATCTT 832660 Query 20647 GACTCCTGTTCT-TGAAAGCTCCCTGG 20672 |||||| |||| || |||||| ||| Sbjct 832661 CACTCCT-TTCTCAGAGAGCTCCTTGG 832686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441339619799760