Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Larimichthys_20crocea_20[refseq_20GCF_5F000972845.1_202015-04-21] 6,014 sequences; 678,938,134 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1327 161 1e-34 >seq1327 Length=1883937 Score = 161 bits (178), Expect = 1e-34 Identities = 142/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || ||||| | ||| || | ||||||||| || |||| |||||||| || ||||| Sbjct 831683 CTTGAGTCCGGTGATGTGTGCGATCATGTAGGTAAGAAGCGCATAGCTGGCGATATTGAA 831742 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || ||||| ||||||||||| || || | |||||||||||| ||||| ||||| || || Sbjct 831743 AGGCACCCCGAGGCCCATGTCACCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATC 831802 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTC 147158 | |||||| ||||| |||||| |||||| || ||||| |||||| ||||||||| Sbjct 831803 GCACACGTAGAACTGACACAGGGCGTGGCAGGGGGGCAGAGCCATGAAGGGCAGGTC 831859 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/140 (76%), Gaps = 6/140 (4%) Strand=Plus/Plus Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 ||||||||||| ||||||||||| |||||||| || ||||||||||| || ||| | | Sbjct 832548 GCCCCAAAGTGTCTCCACTGGAAACCGTACACGGGTCCCAGGTCGCCTTCCTCTCTATCC 832607 Query 147343 GAGAAGCCCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 | ||| |||| | ||| || || || | ||||||| ||| ||||| || |||| Sbjct 832608 GTGAA-CCCG--AGATTGTCCAGGAAGTCTCGAGACCCGTTGGCTTCCCAAATCTTCACT 832664 Query 147400 CCCTTGGCGGAGAGCTCCTT 147419 || || | ||||||||||| Sbjct 832665 CCTTTCTCAGAGAGCTCCTT 832684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583444136289600