Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Larimichthys_20crocea_20[refseq_20GCF_5F000972845.1_202015-04-21] 6,014 sequences; 678,938,134 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq649 109 7e-19 >seq649 Length=1139610 Score = 109 bits (120), Expect = 7e-19 Identities = 234/350 (67%), Gaps = 0/350 (0%) Strand=Plus/Plus Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751 || || ||||| || |||||||| || ||||| | ||||| |||||||| ||||| || Sbjct 929504 GACTTCCCCATTGCTTACTCGATGGTAATCCATGAGAAGATTGAGATGTTTGAGCGACTT 929563 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGC 13811 || | || || || || || |||||| |||| || || || |||||| || ||| Sbjct 929564 CTACGAGCTATTTATGCTCCTCAGAACATCTATTGTGTGCATGTGGACAGGAAATCCTCA 929623 Query 13812 GACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCC 13871 || || | | || ||| || | ||||| ||||| ||| | ||| Sbjct 929624 GAAACATTTAGGATAGCAGTGGGGGCAATTATCTCCTGCTTTCCTAATGTGTTTATAGCC 929683 Query 13872 CACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGC 13931 | | | | |||||| || | || ||| ||| |||||||| || | | |||| Sbjct 929684 AGCAGATTAGAAAGCGTGGTATATGCTTCATGGTCTCGGGTGCAGGCAGATTTGAACTGC 929743 Query 13932 ATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGATG 13991 ||| || ||| ||| | | || |||||||||||||||| ||| || |||| Sbjct 929744 ATGGAAGATCTGCTGAGCTCACACATCCAGTGGAGGTACCTGCTTAACACCTGTGGGACA 929803 Query 13992 GACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCT 14041 |||||||| |||| ||||| ||||| || | |||||||| |||||| Sbjct 929804 GACTTCCCCATCAAAACCAATAGAGAGATGGTTCAGGCGCTGACGGCCCT 929853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658689679280640