Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq963 89.7 5e-13
seq375 89.7 5e-13
seq52 89.7 5e-13
>seq963
Length=229635
Score = 89.7 bits (98), Expect = 5e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
|||||||||||||| || |||||||| || || | || ||||| |||| |||||
Sbjct 212699 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 212640
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344
| |||||| |||||||| || || || || ||||| || ||||| |||| ||||| ||
Sbjct 212639 AGCCAGAAGATCGCAGCGAACGAACCAGAGAAGAAGATTCCCTCCACAGCGGCAAAGGC 212581
>seq375
Length=30079
Score = 89.7 bits (98), Expect = 5e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
|||||||||||||| || |||||||| || || | || ||||| |||| |||||
Sbjct 25677 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 25736
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344
| |||||| |||||||| || || || || ||||| || ||||| |||| ||||| ||
Sbjct 25737 AGCCAGAAGATCGCAGCGAACGAACCAGAGAAGAAGATTCCCTCCACAGCGGCAAAGGC 25795
>seq52
Length=1057507
Score = 89.7 bits (98), Expect = 5e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
|||||||||||||| || |||||||| || || | || ||||| |||| |||||
Sbjct 13948 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 14007
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344
| |||||| |||||||| || || || || ||||| || ||||| |||| ||||| ||
Sbjct 14008 AGCCAGAAGATCGCAGCGAACGAACCAGAGAAGAAGATTCCCTCCACAGCGGCAAAGGC 14066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511390056674560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |