Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09] 3,808 sequences; 668,481,366 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq662 91.5 2e-13 >seq662 Length=458005 Score = 91.5 bits (100), Expect = 2e-13 Identities = 176/255 (69%), Gaps = 6/255 (2%) Strand=Plus/Plus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 ||||||||| |||||||||||||| ||||| | ||| || || |||| || | || Sbjct 338094 GAACTTCTCAAAGTTCCAGGCCACATCGTTCCTGCAGACGGGGCTCCAGATGATTAACTT 338153 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262 |||||| ||| || ||| || || || || ||| || || | ||||| Sbjct 338154 TGGGTCGGTCATCAGGGTGGCTGGCTCATCACTGGGGAACGGGAGCTTTTCCCTCAGGAA 338213 Query 83263 GGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTT-CTCGAAGAGCATAAA 83319 |||| || ||||| || |||| | |||| || || ||||| ||| | |||| ||| Sbjct 338214 CACGAACAGGGGATGAGCATCCTTCC--CGTTCACATC-CACTTTCTCCAGGAGCTGAAA 338270 Query 83320 GTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATT 83379 || || || ||||| || ||||||||||| | |||||| || | ||| || |||| Sbjct 338271 CTTTGGTTCAAAGCCATTTCCAGGACGGACATACTTCAGAGACAAGAGGATTTCCTCATT 338330 Query 83380 CTGGGCGTTTTCCTG 83394 || | ||| ||||| Sbjct 338331 CTTGCAGTTCTCCTG 338345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608767821272320