Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09] 3,808 sequences; 668,481,366 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1756 82.4 5e-11 >seq1756 Length=808860 Score = 82.4 bits (90), Expect = 5e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||| ||||||||||| | || | || | ||||| || || || |||||||| || Sbjct 97644 GTGATGTGGGCGATCATGTAGGTAAGAAGTGCGTAGCTGGCGATATTGAAAGGCACTCCC 97585 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || ||||| || | || | || || | |||||| || |||| ||||||||||| || Sbjct 97584 AGACCCATGTCGCCCGACCGCTGGTACAGCTGACACGACAGCTCACCATCACACACGTAG 97525 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||| | | | || |||||||||| ||||| Sbjct 97524 AACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCAT 97490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346767905754560