Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09] 3,808 sequences; 668,481,366 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq1988 105 1e-17 >seq1988 Length=2502155 Score = 105 bits (116), Expect = 1e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 51901 TGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATACTTAGG 51960 |||| |||||| || |||||||| | |||||||||||||| || |||||||| || ||| Sbjct 1095688 TGGTGGTACTACATCTCCAAAGGAGTGGAATACTTGGATACAGTGTTTTTCATCCTGAGG 1095747 Query 51961 AAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTTACTCTA 52020 || || || || ||||| || || || ||||| || ||||| | || ||||| | || Sbjct 1095748 AAGAAGTTCAACCAGGTCAGCTTCCTCCACGTCTACCATCACTGCACCATGTTCATCCTG 1095807 Query 52021 GGATGGATAGGTATTAAATGG 52041 | ||||| ||||| || ||| Sbjct 1095808 TGGTGGATTGGTATCAAGTGG 1095828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923152855832320