Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09] 3,808 sequences; 668,481,366 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1756 86.0 5e-12 >seq1756 Length=808860 Score = 86.0 bits (94), Expect = 5e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATG 20452 |||| | |||||| |||| || || || || ||||| || ||||| | || || Sbjct 97482 TGCCCCTCATGGCTCTGCCCCCCTGCCACGCCCTCTGCCAGTTCTACGTGTGTGATGGTG 97541 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 | |||||||||| |||| || || || | || ||||| ||||| || |||||||||| Sbjct 97542 AGCTGTCGTGTCAGCTGTACCAGCGGTCGGGCGACATGGGTCTGGGAGTGCCTTTCAATA 97601 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 | || || || || || ||||| || ||||| || || | |||| Sbjct 97602 TCGCCAGCTACGCACTTCTTACCTACATGATCGCCCACATCACAG 97646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399165473870560