Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq14 122 7e-23
seq1563 104 2e-17
>seq14
Length=1339370
Score = 122 bits (134), Expect = 7e-23
Identities = 153/209 (73%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| |||||||||||| || ||| |||| ||||
Sbjct 521280 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCCA 521339
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| ||||| || || || |||| || ||| ||||| ||||| | || ||||||||| |
Sbjct 521340 GCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGGA 521399
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | | | |||| | ||| ||||||| ||| || |||||||
Sbjct 521400 TCTTAGCCTTGACGTTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGC 521459
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337
| ||||| |||||||| ||||| ||||||
Sbjct 521460 CAGTCAGGGTCTTCACGAAGATCTGCATG 521488
Score = 98.7 bits (108), Expect = 8e-16
Identities = 148/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| ||||||||||| || ||| | || ||||
Sbjct 521052 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCA 521111
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || ||||| || || | ||||| ||||| ||||| | || ||||| ||| |
Sbjct 521112 GCTGCTTCCCGGCAAAGATGAGACGCTGCTGGTCTGGAGGGATTCCTTCCTTATCCTGGA 521171
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || || || | | | | |||| | ||| ||||||| ||| || |||||||
Sbjct 521172 TCTTGGCTTTGACGTTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTGC 521231
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337
| ||||| |||||||| ||||| ||||||
Sbjct 521232 CAGTCAGGGTCTTCACGAAGATCTGCATG 521260
Score = 93.3 bits (102), Expect = 3e-14
Identities = 148/211 (70%), Gaps = 1/211 (0%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| ||||||||||| || || |||| ||||
Sbjct 521508 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACGGCCGTCTTCCA 521567
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| ||||| || || || |||| || ||| ||||| ||||| | || || || ||| |
Sbjct 521568 GCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTATCCTGGA 521627
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | | |||| | ||| ||||||| || || ||||| |
Sbjct 521628 TCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCGACCTCCAAAGTGATGGTCTTAC 521687
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
| ||||| |||||||||||||| ||||| ||
Sbjct 521688 CAGTCAGGGTCTTCACAAAGATCTGCATCTT 521718
>seq1563
Length=18910200
Score = 104 bits (114), Expect = 2e-17
Identities = 149/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| ||||||||||| || ||| | || ||||
Sbjct 5356705 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCA 5356764
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || ||||| || ||||||| ||| ||||| || || | || ||||||||| |
Sbjct 5356765 GCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGA 5356824
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | | | | || | ||| ||||||| ||| || |||||||
Sbjct 5356825 TCTTGGCCTTGACATTCTCAATGGTATCGCTTGGCTCGACCTCCAGGGTGATGGTCTTGC 5356884
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337
| || || || ||||||||||| ||||||
Sbjct 5356885 CTGTGAGGGTTTTCACAAAGATCTGCATG 5356913
Score = 102 bits (112), Expect = 6e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| || || ||| ||||||||| ||||||||||| || ||| | || |||
Sbjct 5351065 ACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCC 5351124
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || |||| || ||| ||||| || || | || |||||||||
Sbjct 5351125 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 5351184
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| ||| ||| || | | | | |||| | ||| ||||| | ||| || ||||||
Sbjct 5351185 ATCTTTGCCTTGACATTCTCGATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGTCTTG 5351244
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGT 45338
|| || || ||||| |||||||| |||||||
Sbjct 5351245 CCAGTGAGGGTCTTGACAAAGATCTGCATGT 5351275
Score = 98.7 bits (108), Expect = 8e-16
Identities = 148/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| ||||||||||| || ||| | || ||||
Sbjct 5356021 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCA 5356080
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || ||||| || |||| || ||| ||||| || || | || ||||||||| |
Sbjct 5356081 GCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGA 5356140
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | | | |||| | || ||||||| ||| || |||||||
Sbjct 5356141 TCTTGGCCTTGACATTCTCAATGGTGTCACTGGGTTCAACCTCCAGGGTGATGGTCTTGC 5356200
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337
| || || ||||| |||||||| ||||||
Sbjct 5356201 CAGTAAGGGTCTTGACAAAGATCTGCATG 5356229
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||| |||| | | |||| || || ||| ||||||||| |||||||||||
Sbjct 5356229 GCCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 5356288
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| ||| | || ||||| || || || || || |||| || ||| ||||| || ||
Sbjct 5356289 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGG 5356348
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| || ||||||||| || || ||| || | | | | |||| | ||| ||
Sbjct 5356349 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTTGGCTCAAC 5356408
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||||| ||| || |||||||| || || ||||| || ||||| ||||||
Sbjct 5356409 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 5356457
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||| |||| | | |||| || || ||| ||||||||| |||||||||||
Sbjct 5350818 GCCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 5350877
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| ||| | || ||||| || || || || || |||| || ||| ||||| || ||
Sbjct 5350878 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGG 5350937
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| || ||||||||| || || || || | | | | |||| | ||| ||
Sbjct 5350938 AATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTCACTTGGCTCAAC 5350997
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| ||| || |||||||| || || ||||| |||||||| |||||
Sbjct 5350998 CTCCAGGGTGATGGTCTTGCCTGTAAGGGTCTTGACAAAGATCTGCAT 5351045
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||| |||| | | |||| || || ||| ||||||||| |||||||||||
Sbjct 5356457 GCCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 5356516
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| ||| | || ||||| || || || || || |||| || ||| ||||| || ||
Sbjct 5356517 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGG 5356576
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| || ||||||||| || || ||| || | | | | |||| | ||| ||
Sbjct 5356577 AATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCGAC 5356636
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| ||| || |||||||| || || ||||| || ||||| |||||
Sbjct 5356637 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 5356684
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| ||||||||||| || ||| | || ||||
Sbjct 5355793 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCA 5355852
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || || || || |||| || ||| ||||| || || | || ||||||||| |
Sbjct 5355853 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGA 5355912
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | | | |||| | ||| ||||||| ||| || |||||||
Sbjct 5355913 TCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCAACCTCCAGGGTGATGGTCTTGC 5355972
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| || || || || |||||||| |||||
Sbjct 5355973 CAGTGAGGGTTTTGACAAAGATCTGCAT 5356000
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| |||| | | |||| || || ||| ||||||||| |||||||||||
Sbjct 5350591 CCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 5350650
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || ||||| || || || || || |||| || ||| ||||| || ||
Sbjct 5350651 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 5350710
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| || ||||||||| || || ||| || | | | | |||| | || |||
Sbjct 5350711 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGTTCAACC 5350770
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||| ||| || |||||||| || || ||||| || ||||| ||||||
Sbjct 5350771 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 5350818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395056864559968
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