Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09] 3,808 sequences; 668,481,366 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2387 113 9e-20 >seq2387 Length=643009 Score = 113 bits (124), Expect = 9e-20 Identities = 178/255 (70%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 94785 GCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACC 94844 ||||| |||||| || | |||||||||| || || ||| || || |||||||| || Sbjct 86874 GCCGATTCCTCCGGCCGATTTGGAGATGAGGGCGCACTGCTTCAGCGTGTCATAAATGCC 86815 Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904 || ||||| || || | | | | || |||||||| ||| || || || || || Sbjct 86814 TTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGT 86755 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 |||| ||| || ||||| || || || ||||| || | | | || | || | || Sbjct 86754 TCCAGCATTGAAGAGTGTAGGAGAGGCGTGGGTGAACCACTTCTCTGAGAGCAGGTTGTA 86695 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 || || ||| | | | ||| |||| || ||| |||||||||||||| | ||| | ||| Sbjct 86694 GGTCTCGATGGCCGCCTCGATATCTGTTCTGTGGATGCCGACAGCCACTCTCATTAGCAT 86635 Query 95025 GTCCTGAGGGCGCTC 95039 || |||||| ||||| Sbjct 86634 GTGCTGAGGCCGCTC 86620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989535718196640