Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09] 3,808 sequences; 668,481,366 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq37 150 1e-31 >seq37 Length=4910627 Score = 150 bits (166), Expect = 1e-31 Identities = 176/235 (75%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 91799 CATTTCCCTGTCTTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA 91858 || |||| | |||||||||| | ||||||| || ||| |||| ||||| | ||| ||| Sbjct 4187633 CACTTCCGTACCTTTTCCTGCCAGGAGGACTGCACCATAATCACAGACACCG-CAGCCAA 4187575 Query 91859 -CTGGAACAAAGTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCT 91917 || || | || |||||||||||||| || |||| || ||||| || || || ||||| Sbjct 4187574 GCTAGAGCGCAGCGGCTTCTACTGGGGCCCCCTGGGAGTGGAGGACGCCCACCGCATGCT 4187515 Query 91918 GCGCAACTCGGCACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTT 91977 | | ||| | | ||||| ||||| ||||| || || ||| |||| || ||| |||| || Sbjct 4187514 GAGGAACGCTCCGCTGGGAAGCTTCCTCATCCGCGACAGCCGGCAGAAAGACATCTTCTT 4187455 Query 91978 CACGCTGTCGTATCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAG 92032 ||||||||| || ||| | || ||| || ||||| ||| | || || |||||| Sbjct 4187454 CACGCTGTCCTACCACGCCAAGAGCGGGCCGGTCAGCGTGCGCATCGACTACAAG 4187400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356217067198624