Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq1756 127 1e-24
>seq1756
Length=808860
Score = 127 bits (140), Expect = 1e-24
Identities = 134/175 (77%), Gaps = 1/175 (1%)
Strand=Plus/Minus
Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832
||||| ||||||||||| ||||| | |||||||||||| |||||||| ||||| |||||
Sbjct 97169 CATGTTTGTGTACTCTGCCCCGAAGTGCCTCCACTGGAAACCGTACACAGGTCCCAGGTC 97110
Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892
|| || || |||| | || || || |||| || || | ||| || ||||| ||
Sbjct 97109 GCCCTCCTCTCTGTCCGTGAACCCAAGGTTGTCCAGGAAATCCCGGGACCCGTTGGCATC 97050
Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 25946
||| ||||| ||||| ||| | |||||||| |||| ||||| || |||| ||||
Sbjct 97049 CCAAATCTTCACCCCTTTCGCTGAGAGCTCCTTGGCATTTGTTGATCCCTGTGAC 96995
Score = 109 bits (120), Expect = 4e-19
Identities = 121/160 (76%), Gaps = 1/160 (1%)
Strand=Plus/Minus
Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565
|| |||||||| || || || |||||||||||| || || || || || | ||||||
Sbjct 97635 GCGATCATGTAGGTAAGAAGTGCGTAGCTGGCGATATTGAAAGGCACTCCCAGACCCATG 97576
Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625
|| ||| |||| |||||| ||||||||||| ||||| | || | |||||| ||||| ||
Sbjct 97575 TCGCCC-GACCGCTGGTACAGCTGACACGACAGCTCACCATCACACACGTAGAACTGGCA 97517
Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCT 25665
| || || ||| || || ||||| || ||| || ||||
Sbjct 97516 GAGGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTCT 97477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340121814213984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |