Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq14 116 3e-21
seq1563 104 2e-17
>seq14
Length=1339370
Score = 116 bits (128), Expect = 3e-21
Identities = 166/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||||| || | || || | ||| || ||||||||||| || ||||||||||| | |
Sbjct 521489 CCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 521548
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | |||| |||| |||||||| ||| | || |||| ||| |||||| |||
Sbjct 521549 AAGGTACGGCCGTCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGAGGG 521608
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| || ||||| || || || || ||| || | | | ||||||| ||||||
Sbjct 521609 ATTCCTTCTTTATCCTGGATCTTGGC--CTTGACATTTTCAATGGTGTCGCTGGGCTCGA 521666
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
|||| |||||||| || || ||||| || || ||||| |||||||| ||
Sbjct 521667 CCTCCAAAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATCTT 521718
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||||| || | || || | ||| || ||||||||||| || |||||||||||||
Sbjct 521261 CCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 521320
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | |||| |||| |||||||| ||| | || |||| ||| ||||| |||
Sbjct 521321 AGGGTGCGGCCGTCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGG 521380
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| || || ||||| || || || ||| || | | | ||||| | ||||||
Sbjct 521381 ATTCCTTCCTTGTCCTGGATCTTAGC--CTTGACGTTCTCGATGGTGTCACTGGGCTCAA 521438
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||| || || ||||| || || || || ||||||||
Sbjct 521439 CCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 521487
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||||| || | || || | ||| || ||||||||||| || ||||||||||| |
Sbjct 521033 CCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 521092
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | || |||| || || || ||| | || || ||||| ||||| |||
Sbjct 521093 AGGGTGCGGCCATCTTCCAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGGTCTGGAGGG 521152
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| || || || || || || ||| || || | | | ||||||| ||||||
Sbjct 521153 ATTCCTTCCTTATCCTGGATCTTGGCT--TTGACGTTCTCGATGGTGTCGCTGGGCTCGA 521210
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||| || || ||||| || || || || ||||||||
Sbjct 521211 CCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 521259
>seq1563
Length=18910200
Score = 104 bits (114), Expect = 2e-17
Identities = 153/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||| || ||||||||||| || ||||||||||| | | ||| | | ||
Sbjct 5356244 CAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5356303
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| ||||| || | ||| || |||||
Sbjct 5356304 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5356363
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || |||||| | | | ||||||| ||||| |||| |||||||
Sbjct 5356364 CTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCGCTTGGCTCAACCTCCAGGGTGATG 5356421
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||| || || ||||| || ||||||||
Sbjct 5356422 GTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 5356456
Score = 98.7 bits (108), Expect = 8e-16
Identities = 152/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||| || ||||||||||| || ||||||||||| | | ||| | | ||
Sbjct 5350605 CAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5350664
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| ||||| || | ||| || |||||
Sbjct 5350665 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5350724
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || |||||| | | | ||||| | ||| || |||| |||||||
Sbjct 5350725 CTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCACTGGGTTCAACCTCCAGGGTGATG 5350782
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||| || || ||||| || ||||||||
Sbjct 5350783 GTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 5350817
Score = 98.7 bits (108), Expect = 8e-16
Identities = 152/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||| || ||||||||||| || ||||||||||| | | ||| | | ||
Sbjct 5350833 CAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5350892
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| ||||| || | ||| || |||||
Sbjct 5350893 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5350952
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || ||| ||||| | | | ||||| | ||||| |||| |||||||
Sbjct 5350953 CTGGATCTTGGCT--TTCACGTTCTCAATGGTGTCACTTGGCTCAACCTCCAGGGTGATG 5351010
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || || || || |||||||| ||||||||
Sbjct 5351011 GTCTTGCCTGTAAGGGTCTTGACAAAGATCTGCAT 5351045
Score = 98.7 bits (108), Expect = 8e-16
Identities = 152/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| || | ||| || ||||||||||| || ||||||||||| | | ||| | | ||
Sbjct 5355788 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5355847
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| ||||| || | ||| || |||||
Sbjct 5355848 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5355907
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || ||| || | | | ||||||| ||||| |||| |||||||
Sbjct 5355908 CTGGATCTTGGC--CTTGACATTCTCAATGGTGTCGCTTGGCTCAACCTCCAGGGTGATG 5355965
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || || || ||||||||||| ||||||||
Sbjct 5355966 GTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 5356000
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||| || ||||||||||| || ||||||||||| | | ||| | | ||
Sbjct 5351061 CAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5351120
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| ||||| || | ||| || |||||
Sbjct 5351121 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5351180
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||||| ||| || | | | ||||| | ||||| || | |||||||
Sbjct 5351181 CTGGATCTTTGC--CTTGACATTCTCGATGGTGTCACTTGGCTCAACCTCAAGGGTGATG 5351238
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || || || || |||||||| ||||||||
Sbjct 5351239 GTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 5351273
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||| || ||||||||||| || ||||||||||| | | ||| | | ||
Sbjct 5356472 CAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5356531
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| ||||| || | ||| || |||||
Sbjct 5356532 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5356591
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || ||| || | | | ||||||| ||||| |||| |||||||
Sbjct 5356592 CTGGATCTTGGC--CTTGACATTCTCAATGGTGTCGCTTGGCTCGACCTCCAGGGTGATG 5356649
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || || || || ||||| || ||||||||
Sbjct 5356650 GTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 5356684
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| || | ||| || ||||||||||| || ||||||||||| | | ||| | | ||
Sbjct 5357156 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5357215
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| ||||| || | ||| || |||||
Sbjct 5357216 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5357275
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || ||| ||||| | | | || |||| |||||| || | |||||||
Sbjct 5357276 CTGGATCTTGGCT--TTCACGTTCTCAATGGTATCGCTGGGCTCAACCTCAAGGGTGATG 5357333
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
|| || || || || ||||| ||||| |||||||| ||
Sbjct 5357334 GTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATGTT 5357371
Score = 89.7 bits (98), Expect = 4e-13
Identities = 150/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| || | ||| || ||||||||||| || ||||||||||| | | ||| | | ||
Sbjct 5356016 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5356075
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| ||||| || | ||| || |||||
Sbjct 5356076 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5356135
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || ||| || | | | ||||| | ||| || |||| |||||||
Sbjct 5356136 CTGGATCTTGGC--CTTGACATTCTCAATGGTGTCACTGGGTTCAACCTCCAGGGTGATG 5356193
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || || || || |||||||| ||||||||
Sbjct 5356194 GTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 5356228
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/215 (69%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| || | ||| || ||||||||||| || ||||||||||| | | ||| | | ||
Sbjct 5356700 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5356759
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || | || ||| ||||| || | ||| || |||||
Sbjct 5356760 TTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5356819
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || ||| || | | | || |||| ||||| |||| |||||||
Sbjct 5356820 CTGGATCTTGGC--CTTGACATTCTCAATGGTATCGCTTGGCTCGACCTCCAGGGTGATG 5356877
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || || || ||||| ||||| ||||||||
Sbjct 5356878 GTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 5356912
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/215 (69%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| || | ||| || ||||||||||| || || |||||||| | | ||| | | ||
Sbjct 5356928 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATATTGTAGTCAGAGAGGGTGCGGCCATC 5356987
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| ||||| || | ||| || |||||
Sbjct 5356988 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5357047
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || ||| || | | | ||||||| ||||| || | |||||||
Sbjct 5357048 CTGGATCTTGGC--CTTGACATTCTCAATGGTGTCGCTTGGCTCAACCTCAAGGGTGATG 5357105
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || || || || |||||||| ||||||||
Sbjct 5357106 GTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 5357140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405069199865920
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