Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1563 181 2e-40
seq14 174 3e-38
seq963 87.8 3e-12
seq375 87.8 3e-12
seq52 87.8 3e-12
>seq1563
Length=18910200
Score = 181 bits (200), Expect = 2e-40
Identities = 171/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| || || |||||||| || |||||||| || || ||||| || |
Sbjct 5350600 AGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 5350659
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || ||||| || ||||||||||||
Sbjct 5350660 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCC 5350719
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||| ||| ||| |||||||| | ||| || |||| ||||
Sbjct 5350720 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGTTCAACCTCCAGGGTG 5350779
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || ||||||||||||||||| ||||||||
Sbjct 5350780 ATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 5350817
Score = 181 bits (200), Expect = 2e-40
Identities = 171/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| || || |||||||| || |||||||| || || ||||| || |
Sbjct 5351056 AGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 5351115
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || ||||| || ||||||||||||
Sbjct 5351116 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCC 5351175
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || |||||||||||||| |||||||||||| || || || || | ||||
Sbjct 5351176 TTGTCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTTGGCTCAACCTCAAGGGTG 5351235
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || |||||||||||||| || ||||||||
Sbjct 5351236 ATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 5351273
Score = 181 bits (200), Expect = 2e-40
Identities = 171/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| || || |||||||| || |||||||| || || ||||| || |
Sbjct 5356239 AGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 5356298
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || ||||| || ||||||||||||
Sbjct 5356299 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCC 5356358
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||| ||| ||| |||||||| || || || |||| ||||
Sbjct 5356359 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTTGGCTCAACCTCCAGGGTG 5356418
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || ||||||||||||||||| ||||||||
Sbjct 5356419 ATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 5356456
Score = 181 bits (200), Expect = 2e-40
Identities = 171/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| || || |||||||| || |||||||| || || ||||| || |
Sbjct 5356467 AGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 5356526
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || ||||| || ||||||||||||
Sbjct 5356527 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCC 5356586
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| |||||||| ||| |||||||| || || || |||| ||||
Sbjct 5356587 TTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCGACCTCCAGGGTG 5356646
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || ||||||||||||||||| ||||||||
Sbjct 5356647 ATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 5356684
Score = 174 bits (192), Expect = 3e-38
Identities = 164/208 (79%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || |||||||| || |||||||| || || ||||| || | |||||||| |
Sbjct 5356021 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCA 5356080
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|||||| ||||| || || || || || ||||| || ||||||||||||||||| || |
Sbjct 5356081 GCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGA 5356140
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| |||||||| ||| |||||||| | ||| || |||| ||||||||| || |
Sbjct 5356141 TCTTGGCCTTGACATTCTCAATGGTGTCACTGGGTTCAACCTCCAGGGTGATGGTCTTGC 5356200
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || ||||||||||| || ||||||||
Sbjct 5356201 CAGTAAGGGTCTTGACAAAGATCTGCAT 5356228
Score = 170 bits (188), Expect = 4e-37
Identities = 180/237 (76%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 68225 ATTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTT 68284
|||||| | || || | || |||| || | || || |||||||| || ||||||||
Sbjct 5355764 ATTTTACTGCCCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTT 5355823
Query 68285 ATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTG 68344
|| || ||||| || | |||||||| | |||||| || || || || || || || ||
Sbjct 5355824 GTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTG 5355883
Query 68345 GTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGC 68404
||| || ||||||||||||||||| || ||||| |||||||| ||| ||||||||
Sbjct 5355884 GTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCT 5355943
Query 68405 TGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || |||| ||||||||| || || |||||||| ||||| || ||||||||
Sbjct 5355944 TGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 5356000
Score = 168 bits (186), Expect = 1e-36
Identities = 168/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| || || |||||||| || |||||||| || || ||||| || |
Sbjct 5350828 AGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 5350887
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || ||||| || ||||||||||||
Sbjct 5350888 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCC 5350947
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| || || ||| ||| |||||||| || || || |||| ||||
Sbjct 5350948 TTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTCACTTGGCTCAACCTCCAGGGTG 5351007
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || ||||||||||| || ||||||||
Sbjct 5351008 ATGGTCTTGCCTGTAAGGGTCTTGACAAAGATCTGCAT 5351045
Score = 165 bits (182), Expect = 2e-35
Identities = 162/208 (78%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || |||||||| || ||||| || || || ||||| || | |||||||| |
Sbjct 5356933 CAAGATGGAGGGTGGACTCCTTCTGGATATTGTAGTCAGAGAGGGTGCGGCCATCTTCCA 5356992
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|||||| || || || || || || || ||||| || ||||||||||||||||| || |
Sbjct 5356993 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGA 5357052
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| |||||||| ||| |||||||| || || || || | ||||||||| || |
Sbjct 5357053 TCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCAACCTCAAGGGTGATGGTCTTGC 5357112
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| |||||||||||||| || ||||||||
Sbjct 5357113 CTGTGAGGGTCTTGACAAAGATCTGCAT 5357140
Score = 159 bits (176), Expect = 6e-34
Identities = 161/208 (77%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || |||||||| || |||||||| || || ||||| || | |||||||| |
Sbjct 5356705 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCA 5356764
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|||||| ||||| || || | || || ||||| || ||||||||||||||||| || |
Sbjct 5356765 GCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGA 5356824
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| |||||||| ||| ||||| || || || || |||| ||||||||| || |
Sbjct 5356825 TCTTGGCCTTGACATTCTCAATGGTATCGCTTGGCTCGACCTCCAGGGTGATGGTCTTGC 5356884
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| |||||||| || || || ||||||||
Sbjct 5356885 CTGTGAGGGTTTTCACAAAGATCTGCAT 5356912
Score = 154 bits (170), Expect = 3e-32
Identities = 162/209 (78%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || |||||||| || |||||||| || || ||||| || | |||||||| |
Sbjct 5357161 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCA 5357220
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|||||| ||||| || || || || || ||||| || ||||||||||||||||| || |
Sbjct 5357221 GCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGA 5357280
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTT 68432
|||| || || ||| ||| ||||| || ||| | || || || | ||||||||| ||
Sbjct 5357281 TCTTGGCTTTCACGTTCTCAATGGTATC-GCTGGGCTCAACCTCAAGGGTGATGGTCTTG 5357339
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| |||||||| || || || ||||||||
Sbjct 5357340 CCAGTGAGGGTTTTCACAAAGATCTGCAT 5357368
>seq14
Length=1339370
Score = 174 bits (192), Expect = 3e-38
Identities = 181/235 (77%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287
||| |||||||| | || || | || | || || |||||||| || |||||||| ||
Sbjct 521026 TTAGTTTCCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTA 521085
Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347
|| ||||| || | |||||||| | |||||||||||| || ||||| | || |||||
Sbjct 521086 GTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGGTC 521145
Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-G 68406
|| || || |||||||| || || ||||| || |||||| |||||||||||| ||| |
Sbjct 521146 TGGAGGGATTCCTTCCTTATCCTGGATCTTGGCTTTGACGTTCTCGATGGTGTC-GCTGG 521204
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||| ||||||||| || || || |||||||| ||||| ||||||||
Sbjct 521205 GCTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 521259
Score = 159 bits (176), Expect = 6e-34
Identities = 161/208 (77%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || |||||||| || |||||||| || |||||||| || | || ||||| |
Sbjct 521280 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCCA 521339
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||| || || || || || || || || ||||| || || || ||||||||||| || |
Sbjct 521340 GCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGGA 521399
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| ||||||||| |||||||||||| | || || |||| ||||||||| || |
Sbjct 521400 TCTTAGCCTTGACGTTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGC 521459
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || |||||||| ||||| ||||||||
Sbjct 521460 CAGTCAGGGTCTTCACGAAGATCTGCAT 521487
>seq963
Length=229635
Score = 87.8 bits (96), Expect = 3e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||||||| | |||||||||| ||||| ||| |||||||||| ||| |||||
Sbjct 213958 CATGACGCCCATCCTCTGGTACTCGCCCACCCGCTTCTCAAAGAAGTTGGTCTTTCCCTC 213899
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030
|| || ||| |||||||||||| |||||||||||
Sbjct 213898 CAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTCTC 213863
>seq375
Length=30079
Score = 87.8 bits (96), Expect = 3e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||||||| | |||||||||| ||||| ||| |||||||||| ||| |||||
Sbjct 24442 CATGACGCCCATCCTCTGGTACTCGCCCACCCGCTTCTCAAAGAAGTTGGTCTTTCCCTC 24501
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030
|| || ||| |||||||||||| |||||||||||
Sbjct 24502 CAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTCTC 24537
>seq52
Length=1057507
Score = 87.8 bits (96), Expect = 3e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||||||| | |||||||||| ||||| ||| |||||||||| ||| |||||
Sbjct 12922 CATGACGCCCATCCTCTGGTACTCGCCCACCCGCTTCTCAAAGAAGTTGGTCTTTCCCTC 12981
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030
|| || ||| |||||||||||| |||||||||||
Sbjct 12982 CAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTCTC 13017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921578530773760
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