Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq1756 98.7 9e-16
>seq1756
Length=808860
Score = 98.7 bits (108), Expect = 9e-16
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 20276 TAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGA 20335
|||||||| || || ||||| ||||||| ||||||||| ||||||| ||| |||||||||
Sbjct 97611 TAGCTGGCGATATTGAAAGGCACTCCCAGACCCATGTCGCCCGACCGCTGGTACAGCTGA 97552
Query 20336 CAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCC 20395
|| || |||||||| ||| || || || || || | ||| ||||| || || |||
Sbjct 97551 CACGACAGCTCACCATCACACACGTAGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCC 97492
Query 20396 AT 20397
||
Sbjct 97491 AT 97490
Score = 96.9 bits (106), Expect = 3e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 20527 GTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCT 20586
|||| | ||||| ||||||||||||||||||||||| |||||||||| || ||||||
Sbjct 97160 GTACTCTGCCCCGAAGTGCCTCCACTGGAAACCGTACACAGGTCCCAGGTCGCCCTCCTC 97101
Query 20587 TCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTT 20646
||||| || | || | | ||||||| |||| ||| || || ||||| |||||
Sbjct 97100 TCTGTCCGTGAACCCAAGGTTGTCCAGGAAATCCCGGGACCCGTTGGCATCCCAAATCTT 97041
Query 20647 GACTCCTGTTCTTGAAAGCTCCCTGG 20672
|| ||| | ||| |||||| |||
Sbjct 97040 CACCCCTTTCGCTGAGAGCTCCTTGG 97015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441351790654720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |